arcade-mcp/examples/generic/tools/BM25.py
Sam Partee 7f3abfd1f9
Tool SDK, Schemas (#2)
Co-authored-by: Nate Barbettini <nathanaelb@gmail.com>
2024-07-14 23:37:46 -07:00

158 lines
5.1 KiB
Python

import math
import numpy as np
from typing import Annotated
from multiprocessing import Pool, cpu_count
from arcade.sdk.tool import tool
class BM25:
def __init__(self, corpus, tokenizer=None):
self.corpus_size = 0
self.avgdl = 0
self.doc_freqs = []
self.idf = {}
self.doc_len = []
self.tokenizer = tokenizer
if tokenizer:
corpus = self._tokenize_corpus(corpus)
else:
corpus = self._tokenize(corpus)
nd = self._initialize(corpus)
self._calc_idf(nd)
@staticmethod
def _tokenize(texts: list[str]) -> list[list[str]]:
return [text.split() for text in texts]
def _initialize(self, corpus):
nd = {} # word -> number of documents with word
num_doc = 0
for document in corpus:
self.doc_len.append(len(document))
num_doc += len(document)
frequencies = {}
for word in document:
if word not in frequencies:
frequencies[word] = 0
frequencies[word] += 1
self.doc_freqs.append(frequencies)
for word, freq in frequencies.items():
try:
nd[word] += 1
except KeyError:
nd[word] = 1
self.corpus_size += 1
self.avgdl = num_doc / self.corpus_size
return nd
def _tokenize_corpus(self, corpus):
pool = Pool(cpu_count())
tokenized_corpus = pool.map(self.tokenizer, corpus)
return tokenized_corpus
def _calc_idf(self, nd):
raise NotImplementedError()
def get_scores(self, query):
raise NotImplementedError()
def get_batch_scores(self, query, doc_ids):
raise NotImplementedError()
def get_top_n(self, query, documents, n=5):
assert self.corpus_size == len(
documents
), "The documents given don't match the index corpus!"
query = self._tokenize([query])[0] # tokenize the query
scores = self.get_scores(query)
top_n = np.argsort(scores)[::-1][:n]
return [documents[i] for i in top_n]
class Okapi(BM25):
def __init__(self, corpus, tokenizer=None, k1=1.5, b=0.75, epsilon=0.25):
self.k1 = k1
self.b = b
self.epsilon = epsilon
super().__init__(corpus, tokenizer)
def _calc_idf(self, nd):
"""
Calculates frequencies of terms in documents and in corpus.
This algorithm sets a floor on the idf values to eps * average_idf
"""
# collect idf sum to calculate an average idf for epsilon value
idf_sum = 0
# collect words with negative idf to set them a special epsilon value.
# idf can be negative if word is contained in more than half of documents
negative_idfs = []
for word, freq in nd.items():
idf = math.log(self.corpus_size - freq + 0.5) - math.log(freq + 0.5)
self.idf[word] = idf
idf_sum += idf
if idf < 0:
negative_idfs.append(word)
self.average_idf = idf_sum / len(self.idf)
eps = self.epsilon * self.average_idf
for word in negative_idfs:
self.idf[word] = eps
def get_scores(self, query):
"""
The ATIRE BM25 variant uses an idf function which uses a log(idf) score. To prevent negative idf scores,
this algorithm also adds a floor to the idf value of epsilon.
See [Trotman, A., X. Jia, M. Crane, Towards an Efficient and Effective Search Engine] for more info
:param query:
:return:
"""
score = np.zeros(self.corpus_size)
doc_len = np.array(self.doc_len)
for q in query:
q_freq = np.array([(doc.get(q) or 0) for doc in self.doc_freqs])
score += (self.idf.get(q) or 0) * (
q_freq
* (self.k1 + 1)
/ (q_freq + self.k1 * (1 - self.b + self.b * doc_len / self.avgdl))
)
return score
def get_batch_scores(self, query, doc_ids):
"""
Calculate bm25 scores between query and subset of all docs
"""
assert all(di < len(self.doc_freqs) for di in doc_ids)
score = np.zeros(len(doc_ids))
doc_len = np.array(self.doc_len)[doc_ids]
for q in query:
q_freq = np.array([(self.doc_freqs[di].get(q) or 0) for di in doc_ids])
score += (self.idf.get(q) or 0) * (
q_freq
* (self.k1 + 1)
/ (q_freq + self.k1 * (1 - self.b + self.b * doc_len / self.avgdl))
)
return score.tolist()
@tool
async def text_search(
query: Annotated[str, "The search query"],
texts: Annotated[list[str], "The texts through which to search"],
num_results: Annotated[int, "Number of texts to return"] = 5,
) -> Annotated[list[str], "Most similar texts"]:
"""Use the BM25 algorithm to search through texts
This should only be used for smaller datasets where the number
of texts is less than 100.
"""
bm25 = Okapi(texts)
return bm25.get_top_n(query, texts, num_results)