Treatment-related mortality with bevacizumab in cancer patients: a meta-analysis.

Abstract: CONTEXT Fatal adverse events (FAEs) have been reported in cancer patients treated with the widely used angiogenesis inhibitor bevacizumab in combination with chemotherapy.

Abstract: Currently, the role of bevacizumab in treatment-related mortality is not clear.

Abstract: OBJECTIVE To perform a systematic review and meta-analysis of published randomized controlled trials (RCTs) to determine the overall risk of FAEs associated with bevacizumab.

Abstract: DATA SOURCES PubMed, EMBASE, and Web of Science databases as well as abstracts presented at American Society of Clinical Oncology conferences from January 1966 to October 2010 were searched to identify relevant studies.

Abstract: STUDY SELECTION AND DATA EXTRACTION Eligible studies included prospective RCTs in which bevacizumab in combination with chemotherapy or biological therapy was compared with chemotherapy or biological therapy alone.

Abstract: Summary incidence rates, relative risks (RRs), and 95% confidence intervals (CIs) were calculated using fixed- or random-effects models.

Abstract: DATA SYNTHESIS A total of 10,217 patients with a variety of advanced solid tumors from 16 RCTs were included in the analysis.

Abstract: The overall incidence of FAEs with bevacizumab was 2.5% (95% CI, 1.7%-3.9%).

Abstract: Compared with chemotherapy alone, the addition of bevacizumab was associated with an increased risk of FAEs, with an RR of 1.46 (95% CI, 1.09-1.94; P = .01; incidence, 2.5% vs 1.7%).

Abstract: This association varied significantly with chemotherapeutic agents (P = .045) but not with tumor types (P = .13) or bevacizumab doses (P = .16).

Abstract: Bevacizumab was associated with an increased risk of FAEs in patients receiving taxanes or platinum agents (RR, 3.49; 95% CI, 1.82-6.66; incidence, 3.3% vs 1.0%) but was not associated with increased risk of FAEs when used in conjunction with other agents (RR, 0.85; 95% CI, 0.25-2.88; incidence, 0.8% vs 0.9%).

Abstract: The most common causes of FAEs were hemorrhage (23.5%), neutropenia (12.2%), and gastrointestinal tract perforation (7.1%).

Abstract: CONCLUSION In a meta-analysis of RCTs, bevacizumab in combination with chemotherapy or biological therapy, compared with chemotherapy alone, was associated with increased treatment-related mortality.


Quiescent and active hippocampal neural stem cells with distinct morphologies respond selectively to physiological and pathological stimuli and aging.

Abstract: New neurons are generated in the adult hippocampus throughout life by neural stem/progenitor cells (NSCs), and neurogenesis is a plastic process responsive to external stimuli.

Abstract: We show that canonical Notch signaling through RBP-J is required for hippocampal neurogenesis.

Abstract: Notch signaling distinguishes morphologically distinct Sox2(+) NSCs, and within these pools subpopulations can shuttle between mitotically active or quiescent.

Abstract: Radial and horizontal NSCs respond selectively to neurogenic stimuli.

Abstract: Physical exercise activates the quiescent radial population whereas epileptic seizures induce expansion of the horizontal NSC pool.

Abstract: Surprisingly, reduced neurogenesis correlates with a loss of active horizontal NSCs in aged mice rather than a total loss of stem cells, and the transition to a quiescent state is reversible to rejuvenate neurogenesis in the brain.

Abstract: The discovery of multiple NSC populations with Notch dependence but selective responses to stimuli and reversible quiescence has important implications for the mechanisms of adaptive learning and also for regenerative therapy.


Low serum vitamin D is associated with high risk of diabetes in Korean adults.

Abstract: Vitamin D may play a role in glucose metabolism.

Abstract: A low vitamin D level has been associated with increased risk of diabetes mellitus, but the association has not been confirmed in Asians.

Abstract: Our objective was to examine the association of serum 25-hydroxyvitamin D [25(OH)D] levels with insulin resistance and diabetes mellitus in Korean adults based on a large population-based survey.

Abstract: Cross-sectional analyses were carried out on 5787 Korean adults (2453 men and 3334 women) who were 20 y or older and participated in the Fourth Korea NHANES conducted in 2008.

Abstract: Diabetes mellitus was defined as fasting plasma glucose ≥7 mmol/L or current use of oral hypoglycemic agents or insulin.

Abstract: Insulin resistance was estimated by homeostatic model assessment for insulin resistance (HOMA-IR) and quantitative insulin sensitivity check index (QUICKI).

Abstract: Compared to individuals with a sufficient serum 25(OH)D concentration ≥75 nmol/L, the OR (95% CI) for diabetes mellitus were 1.73 (1.09-2.74), 1.30 (0.91-1.84), and 1.40 (0.99-1.98) for serum 25(OH)D concentrations <25, 25 to <50, and 50 to <75 nmol/L, respectively, after multiple adjustments (P-trend < 0.0001).

Abstract: Furthermore, the serum 25(OH)D level was inversely associated with HOMA-IR (β = -0.061; P = 0.001) and positively associated with QUICKI (β = 0.059; P = 0.001) in overweight or obese participants.

Abstract: In conclusion, a low serum vitamin D concentration is associated with a high risk of diabetes mellitus in Korean adults and the concentration is inversely associated with insulin resistance in those who are overweight or obese.


When NK cells overcome their lack of education.

Abstract: Cells of the immune system have evolved various molecular mechanisms to sense their environment and react to alterations of self.

Abstract: NK cells are lymphocytes with effector and regulatory functions, which are remarkably adaptable to changes in self.

Abstract: In a study published in this issue of the JCI, Tarek and colleagues report the clinical benefits of manipulating NK cell adaptation to self in an innovative mAb-based therapy against neuroblastoma (NB).

Abstract: This novel therapeutic strategy should stimulate further research on NK cell therapies.


Toll-like receptor-3 mediates HIV-1 transactivation via NFκB and JNK pathways and histone acetylation, but prolonged activation suppresses Tat and HIV-1 replication.

Abstract: TLR3 has been implicated in the pathogenesis of several viral infections, including SIV- and HIV-1-induced inflammation and AIDS.

Abstract: However the molecular mechanisms of these TLR3-mediated effects are not known, and it is not known whether HIV interacts with cellular TLR3 to affect disease process.

Abstract: Here we investigate the effects of TLR3 ligands on HIV-1 transactivation using both primary human macrophages and cells containing integrated copies of the HIV-1 promoter.

Abstract: We demonstrate that TLR3 activation induced upregulation of transcription factors such as c-Jun, CCAAT/enhancer-binding protein alpha (CEBPA), signal transducer and activator of transcription (STAT)-1, STAT-2, RELB, and nuclear factor kappa-B1 (NFκB1), most of which are known to regulate the HIV promoter activity.

Abstract: We also demonstrate that TLR3 activation increased HIV-1 transactivation via the c-Jun N-terminal kinase (JNK) and NFκB pathways.

Abstract: This was associated with epigenetic modifications, including decreased histone deacetylase activity, increased histone acetyl transferase (HAT) activity, and increased acetylation of histones H3 and H4 at lysine residues in the nucleosome-0 and nucleosome-1 of the HIV-1 promoter.

Abstract: However, prolonged TLR3 activation decreased HIV-1 transactivation, decreased HAT activity and Tat transcription, and suppressed viral replication.

Abstract: Overall, data suggests that TLR3 can act as viral sensor to mediate viral transactivation, cellular signaling, innate immune response, and inflammation in HIV-infected humans.

Abstract: Our study provides novel insights into the molecular basis for these TLR3-mediated effects.


Patent ductus arteriosus: are current neonatal treatment options better or worse than no treatment at all?

Abstract: Although a moderate-sized patent ductus arteriosus (PDA) needs to be closed by the time a child is 1-2 years old, there is great uncertainty about whether it needs to be closed during the neonatal period.

Abstract: Although 95% of neonatologists believe that a moderate-sized PDA should be closed if it persists in infants (born before 28 weeks) who still require mechanical ventilation, the number of neonatologists who treat a PDA when it occurs in infants who do not require mechanical ventilation varies widely.

Abstract: Both the high likelihood of spontaneous ductus closure and the absence of randomized controlled trials, specifically addressing the risks and benefits of neonatal ductus closure, add to the current uncertainty.

Abstract: New information suggests that early pharmacologic treatment has several important short-term benefits for the preterm newborn.

Abstract: By contrast, ductus ligation, while eliminating the detrimental effects of a PDA on lung development, may create its own set of morbidities that counteract many of the benefits derived from ductus closure.


A conserved phosphatase cascade that regulates nuclear membrane biogenesis.

Abstract: A newly emerging family of phosphatases that are members of the haloacid dehalogenase superfamily contains the catalytic motif DXDX(T/V).

Abstract: A member of this DXDX(T/V) phosphatase family known as Dullard was recently shown to be a potential regulator of neural tube development in Xenopus [Satow R, Chan TC, Asashima M (2002) Biochem Biophys Res Commun 295:85-91].

Abstract: Herein, we demonstrate that human Dullard and the yeast protein Nem1p perform similar functions in mammalian cells and yeast cells, respectively.

Abstract: In addition to similarity in primary sequence, Dullard and Nem1p possess similar domains and show similar substrate preferences, and both localize to the nuclear envelope.

Abstract: Additionally, we show that human Dullard can rescue the aberrant nuclear envelope morphology of nem1Delta yeast cells, functionally replacing Nem1p.

Abstract: Finally, Nem1p, has been shown to deposphorylate the yeast phosphatidic acid phosphatase Smp2p [Santos-Rosa H, Leung J, Grimsey N, Peak-Chew S, Siniossoglou S (2005) EMBO J 24:1931-1941], and we show that Dullard dephosphorylates the mammalian phospatidic acid phosphatase, lipin.

Abstract: Therefore, we propose that Dullard participates in a unique phosphatase cascade regulating nuclear membrane biogenesis, and that this cascade is conserved from yeast to mammals.


Increased expression of CYP1A1 and CYP1B1 in ovarian/peritoneal endometriotic lesions.

Abstract: Endometriosis is an estrogen-dependent disease affecting up to 10% of all premenopausal women.

Abstract: There is evidence that different endometriosis sites show distinct local estrogen concentration, which, in turn, might be due to a unique local estrogen metabolism.

Abstract: We aimed to investigate whether there was a site-specific regulation of selected enzymes responsible for the oxidative metabolism of estrogens in biopsy samples and endometrial and endometriotic stromal cells.

Abstract: Cytochrome P450 (CYP) 1A1 and CYP1B1 mRNA and protein expressions in deep-infiltrating (rectal, retossigmoidal, and uterossacral) lesions, superficial (ovarian and peritoneal) lesions, and eutopic and healthy (control) endometrium were evaluated by real-time PCR and western blot.

Abstract: Using a cross-sectional study design with 58 premenopausal women who were not under hormonal treatment, we were able to identify an overall increased CYP1A1 and CYP1B1 mRNA expression in superficial lesions compared with the healthy endometrium.

Abstract: CYP1A1 mRNA expression in superficial lesions was also greater than in the eutopic endometrium.

Abstract: Interestingly, we found a similar pattern of CYP1A1 and CYP1B1 expression in in vitro stromal cells isolated from ovarian lesions (n=3) when compared with stromal cells isolated from either rectum lesions or eutopic endometrium.

Abstract: In contradiction, there was an increased half-life of estradiol (measured by HPLC-MS-MS) in ovarian endometriotic stromal cells compared with paired eutopic stromal endometrial cells.

Abstract: Our results indicate that there is a site-dependent regulation of CYP1A1 and CYP1B1 in ovarian/peritoneal lesions and ovarian endometriotic stromal cells, whereas a slower metabolism is taking place in these cells.


Eset partners with Oct4 to restrict extraembryonic trophoblast lineage potential in embryonic stem cells.

Abstract: The histone H3 Lys 9 (H3K9) methyltransferase Eset is an epigenetic regulator critical for the development of the inner cell mass (ICM).

Abstract: Although ICM-derived embryonic stem (ES) cells are normally unable to contribute to the trophectoderm (TE) in blastocysts, we find that depletion of Eset by shRNAs leads to differentiation with the formation of trophoblast-like cells and induction of trophoblast-associated gene expression.

Abstract: Using chromatin immmunoprecipitation (ChIP) and sequencing (ChIP-seq) analyses, we identified Eset target genes with Eset-dependent H3K9 trimethylation.

Abstract: We confirmed that genes that are preferentially expressed in the TE (Tcfap2a and Cdx2) are bound and repressed by Eset.

Abstract: Single-cell PCR analysis shows that the expression of Cdx2 and Tcfap2a is also induced in Eset-depleted morula cells.

Abstract: Importantly, Eset-depleted cells can incorporate into the TE of a blastocyst and, subsequently, placental tissues.

Abstract: Coimmunoprecipitation and ChIP assays further demonstrate that Eset interacts with Oct4, which in turn recruits Eset to silence these trophoblast-associated genes.

Abstract: Our results suggest that Eset restricts the extraembryonic trophoblast lineage potential of pluripotent cells and links an epigenetic regulator to key cell fate decision through a pluripotency factor.


Suicides after pregnancy in Finland, 1987-94: register linkage study.

Abstract: OBJECTIVE To determine rates of suicide associated with pregnancy by the type of pregnancy.

Abstract: DESIGN Register linkage study.

Abstract: Information on suicides in women of reproductive age was linked with the Finnish birth, abortion, and hospital discharge registers to find out how many women who committed suicide had had a completed pregnancy during her last year of life.

Abstract: SETTING Nationwide data from Finland.

Abstract: SUBJECTS Women who committed suicide in 1987-94.

Abstract: RESULTS There were 73 suicides associated with pregnancy, representing 5.4% of all suicides in women in this age group.

Abstract: The mean annual suicide rate was 11.3 per 100,000.

Abstract: The suicide rate associated with birth was significantly lower (5.9) and the rates associated with miscarriage (18.1) and induced abortion (34.7) were significantly higher than in the population.

Abstract: The risk associated with birth was higher among teenagers and that associated with abortion was increased in all age groups.

Abstract: Women who had committed a suicide tended to come from lower social classes and were more likely to be unmarried than other women who had had a completed pregnancy.

Abstract: CONCLUSIONS The increased risk of suicide after an induced abortion indicates either common risk factors for both or harmful effects of induced abortion on mental health.


Metformin-associated lactic acidosis: a rare or very rare clinical entity?

Abstract: AIMS Lactic acidosis is a well recognized complication of biguanide therapy which is potentially serious.

Abstract: Although the prevalence of metformin-associated lactic acidosis (MALA) is much lower than that associated with phenformin, it is still being reported sporadically which raises concerns for the practising clinicians.

Abstract: We review the currently available world-wide data of the prevalence of MALA, the risk factors for its development and the current practical guidelines on the use of metformin to minimize the risk of this potential hazard.

Abstract: METHODS An extensive literature search was conducted from both Medline and Ovid (1965-98) using the following keywords: 'Type 2 diabetes mellitus', 'oral hypoglycaemic drugs', 'biguanides', 'metformin-associated lactic acidosis' and 'renal impairment'.

Abstract: RESULTS MALA was found to be a very rare clinical entity, being 20 times less common than phenformin-associated lactic acidosis.

Abstract: Amongst all the risk factors, renal impairment appears to be the major precipitating factor for the development of MALA in metformin-treated patients.

Abstract: We also found cases of MALA where no precipitating factors were identified and the underlying mechanism in these cases remains unclear.

Abstract: Practical recommendations of metformin use to minimize the risk of MALA have been listed based on previous reports.

Abstract: CONCLUSIONS The low prevalence of MALA is comparable to the prevalence of sulphonylurea-induced hypoglycaemia.

Abstract: Metformin has many beneficial metabolic effects in the management of Type 2 diabetes mellitus.

Abstract: Provided that the recommended guidelines for metformin use are strictly adhered to, its widespread use would be safe and the incidence of MALA will be further reduced.


Inborn errors of human JAKs and STATs.

Abstract: Inborn errors of the genes encoding two of the four human JAKs (JAK3 and TYK2) and three of the six human STATs (STAT1, STAT3, and STAT5B) have been described.

Abstract: We review the disorders arising from mutations in these five genes, highlighting the way in which the molecular and cellular pathogenesis of these conditions has been clarified by the discovery of inborn errors of cytokines, hormones, and their receptors, including those interacting with JAKs and STATs.

Abstract: The phenotypic similarities between mice and humans lacking individual JAK-STAT components suggest that the functions of JAKs and STATs are largely conserved in mammals.

Abstract: However, a wide array of phenotypic differences has emerged between mice and humans carrying biallelic null alleles of JAK3, TYK2, STAT1, or STAT5B.

Abstract: Moreover, the high degree of allelic heterogeneity at the human JAK3, TYK2, STAT1, and STAT3 loci has revealed highly diverse immunological and clinical phenotypes, which had not been anticipated.


Mental health problems of homeless children and families: longitudinal study.

Abstract: OBJECTIVE To establish the mental health needs of homeless children and families before and after rehousing.

Abstract: DESIGN Cross sectional, longitudinal study.

Abstract: SETTING City of Birmingham.

Abstract: SUBJECTS 58 rehoused families with 103 children aged 2-16 years and 21 comparison families of low socioeconomic status in stable housing, with 54 children.

Abstract: MAIN OUTCOME MEASURES Children's mental health problems and level of communication; mothers' mental health problems and social support one year after rehousing.

Abstract: RESULTS Mental health problems remained significantly higher in rehoused mothers and their children than in the comparison group (mothers 26% v 5%, P = 0.04; children 39% v 11%, P = 0.0003).

Abstract: Homeless mothers continued to have significantly less social support at follow up.

Abstract: Mothers with a history of abuse and poor social integration were more likely to have children with persistent mental health problems.

Abstract: CONCLUSIONS Homeless families have a high level of complex needs that cannot be met by conventional health services and arrangements.

Abstract: Local strategies for rapid rehousing into permanent accommodation, effective social support and health care for parents and children, and protection from violence and intimidation should be developed and implemented.


The flip side of perception-action coupling: locomotor experience and the ontogeny of visual-postural coupling.

Abstract: The possible role of motor development on psychological function is once again a topic of great theoretical and practical importance.

Abstract: The revival of this issue has stemmed from a different approach to the topic, away from Gesell's interest in the long-term prediction of psychological functions from early motoric assessments, toward an attempt to understand how the acquisition of motor skills orchestrates psychological changes.

Abstract: This paper describes how the acquisition of one motor skill, prone locomotion, has been linked to developmental changes in an infant's ability to regulate posture based on information available in patterns of optic flow.

Abstract: It is argued that the onset of prone locomotion presses the infant to differentiate spatially delimited regions of optic flow to effectively and efficiently control the important subtasks nested within the larger task of locomotion, namely, steering, attending to the surface of support, and maintaining postural control.

Abstract: Following this argument, a research program is described that aims to determine if locomotor experience is causally linked to improvements in the ability to functionalize peripheral optic flow for postural control or whether locomotor experience is merely a maturational forecaster of such improvements.

Abstract: Finally, a hypothesis is put forward that links the emergence of wariness of heights to infants' ability to regulate posture on the basis of peripheral optic flow.

Abstract: The paper's overarching theoretical point is the principle of probabilistic epigenesis, which states that one developmental acquisition produces experiences that bring about a host of new developmental changes in the same and different domains.


Crystal structure of the first plant urease from jack bean: 83 years of journey from its first crystal to molecular structure.

Abstract: Urease, a nickel-dependent metalloenzyme, is synthesized by plants, some bacteria, and fungi.

Abstract: It catalyzes the hydrolysis of urea into ammonia and carbon dioxide.

Abstract: Although the amino acid sequences of plant and bacterial ureases are closely related, some biological activities differ significantly.

Abstract: Plant ureases but not bacterial ureases possess insecticidal properties independent of its ureolytic activity.

Abstract: To date, the structural information is available only for bacterial ureases although the jack bean urease (Canavalia ensiformis; JBU), the best-studied plant urease, was the first enzyme to be crystallized in 1926.

Abstract: To better understand the biological properties of plant ureases including the mechanism of insecticidal activity, we initiated the structural studies on some of them.

Abstract: Here, we report the crystal structure of JBU, the first plant urease structure, at 2.05 A resolution.

Abstract: The active-site architecture of JBU is similar to that of bacterial ureases containing a bi-nickel center.

Abstract: JBU has a bound phosphate and covalently modified residue (Cys592) by beta-mercaptoethanol at its active site, and the concomitant binding of multiple inhibitors (phosphate and beta-mercaptoethanol) is not observed so far in bacterial ureases.

Abstract: By correlating the structural information of JBU with the available biophysical and biochemical data on insecticidal properties of plant ureases, we hypothesize that the amphipathic beta-hairpin located in the entomotoxic peptide region of plant ureases might form a membrane insertion beta-barrel as found in beta-pore-forming toxins.


Studies of nuclear and cytoplasmic behaviour during the five mitotic cycles that precede gastrulation in Drosophila embryogenesis.

Abstract: Using differential interference contrast optics, combined with cinematography, we have studied the morphological changes that the living, syncytial embryo undergoes from stage 10 through 14 of Drosophila embryogenesis, that is just prior to and during formation of the cellular blastoderm.

Abstract: We have supplemented these studies with data collected from fixed, stained, whole embryos.

Abstract: The following information has been obtained.

Abstract: The average duration of nuclear cycles 10, 11, 12 and 13 is about 9, 10, 12 and 21 min, respectively (25 degrees C).

Abstract: In these four cycles, the duration of that portion of the mitotic period that lacks a discrete nuclear envelope is 3, 3, 3 and 5 min, respectively.

Abstract: The length of nuclear cycle 14 varies in a position-specific manner throughout the embryo, the shortest cycles being of 65 min duration.

Abstract: During nuclear cycles 10 through 13, it is commonly observed in living embryos that the syncytial blastoderm nuclei enter (and leave) mitosis in one of two waves that originate nearly simultaneously from the opposite anterior and posterior poles of the embryo, and terminate in its midregion.

Abstract: From our preparations of quick-frozen embryos, we estimate that these mitotic waves take on average about half a minute to travel over the embryonic surface from pole to equator.

Abstract: The yolk nuclei, which remain in the core of the embryo when the rest of the nuclei migrate to the periphery, divide in synchrony with the migrating nuclei at nuclear cycles 8 and 9, and just after the now peripherally located nuclei at nuclear cycle 10.

Abstract: After cycle 10, these yolk nuclei cease dividing and become polyploid.

Abstract: The syncytial embryo has at least three distinct levels of cytoskeletal organization: structured domains of cytoplasm are organized around each blastoderm nucleus; radially directed tracks orient colchicine-sensitive saltatory transport throughout the peripheral cytoplasm; and a long-range organization of the core of the embryo makes possible coherent movements of the large inner yolk mass in concert with each nuclear cycle.

Abstract: This highly organized cytoplasm may be involved in providing positional information for the important process of nuclear determination that is known to occur during these stages.


Activation of liver X receptors and retinoid X receptors prevents bacterial-induced macrophage apoptosis.

Abstract: Microbe-macrophage interactions play a central role in the pathogenesis of many infections.

Abstract: The ability of some bacterial pathogens to induce macrophage apoptosis has been suggested to contribute to their ability to elude innate immune responses and successfully colonize the host.

Abstract: Here, we provide evidence that activation of liver X receptors (LXRs) and retinoid X receptors (RXRs) inhibits apoptotic responses of macrophages to macrophage colony-stimulating factor (M-CSF) withdrawal and several inducers of apoptosis.

Abstract: In addition, combined activation of LXR and RXR protected macrophages from apoptosis caused by infection with Bacillus anthracis, Escherichia coli, and Salmonella typhimurium.

Abstract: Expression-profiling studies demonstrated that LXR and RXR agonists induced the expression of antiapoptotic regulators, including AIM/CT2, Bcl-X(L), and Birc1a.

Abstract: Conversely, LXR and RXR agonists inhibited expression of proapoptotic regulators and effectors, including caspases 1, 4/11, 7, and 12; Fas ligand; and Dnase1l3.

Abstract: The combination of LXR and RXR agonists was more effective than either agonist alone at inhibiting apoptosis in response to various inducers of apoptosis, and it acted synergistically to induce expression of AIM/CT2.

Abstract: Inhibition of AIM/CT2 expression in response to LXR/RXR agonists partially reversed their antiapoptotic effects.

Abstract: These findings reveal unexpected roles of LXRs and RXRs in the control of macrophage survival and raise the possibility that LXR/RXR agonists may be exploited to enhance innate immunity to bacterial pathogens that induce apoptotic programs as a strategy for evading host responses.


p53 binding to nucleosomal DNA depends on the rotational positioning of DNA response element.

Abstract: The sequence-specific binding to DNA is crucial for the p53 tumor suppressor function.

Abstract: To investigate the constraints imposed on p53-DNA recognition by nucleosomal organization, we studied binding of the p53 DNA binding domain (p53DBD) and full-length wild-type p53 protein to a single p53 response element (p53RE) placed near the nucleosomal dyad in six rotational settings.

Abstract: We demonstrate that the strongest p53 binding occurs when the p53RE in the nucleosome is bent in the same direction as observed for the p53-DNA complexes in solution and in co-crystals.

Abstract: The p53RE becomes inaccessible, however, if its orientation in the core particle is changed by approximately 180 degrees.

Abstract: Our observations indicate that the orientation of the binding sites on a nucleosome may play a significant role in the initial p53-DNA recognition and subsequent cofactor recruitment.


Diminished sympathetic nervous system activity in genetically obese (ob/ob) mouse.

Abstract: The genetically obese (ob/ob) mouse exhibits defective thermoregulatory responses to cold exposure.

Abstract: Pathophysiological explanations for this phenomenon have focused on abnormalities in intracellular metabolism or insensitivity of peripheral tissues to the thermogenic effects of catecholamines.

Abstract: Because the sympathetic nervous system (SNS) is subject to feedback regulation, a peripheral impairment in thermogenesis should be associated with a compensatory increase in SNS activity.

Abstract: To examine SNS activity in the ob/ob mouse, norepinephrine (NE) turnover was measured in heart and interscapular brown adipose tissue (IBAT) of ob/ob and lean mice.

Abstract: The results from studies utilizing radiolabeled NE or inhibition of NE biosynthesis with alpha-methyl-p-tyrosine to measure NE turnover demonstrated reductions in SNS activity of 33-56% in heart and of 45-73% in IBAT in ob/ob mice at ambient temperature (22 degrees C) compared with measurements in lean controls.

Abstract: During cold exposure (4 degrees C) NE turnover increased in heart and IBAT to a similar extent in both ob/ob and lean mice, but NE turnover rates in heart, and probably in IBAT as well, remained lower in the obese mice than in the lean despite the gradual development of hypothermia in the ob/ob mice during this period.

Abstract: Administration of naltrexone, a long-acting opiate antagonist, failed to reverse the suppression of SNS activity observed in the ob/ob mice.

Abstract: These data indicate that diminished SNS activity in ob/ob mice may be an additional factor contributing to the defective thermogenesis characteristic of these animals.


Quality of life of young adults with idiopathic short stature: effect of growth hormone treatment. Dutch Growth Hormone Working Group.

Abstract: The aim of the study was to evaluate whether treatment with recombinant human growth hormone (rhGH) affects the quality of life of young adults who were diagnosed as idiopathic short stature (ISS) during childhood, and whether their quality of life and aspects of the personality are different from normal.

Abstract: Experiences and expectations concerning rhGH treatment of the subjects and their parents were also investigated.

Abstract: Eighty-nine subjects were included into the study: 24 subjects (16M, 8F) were treated with rhGH from childhood, whereas 65 subjects (40M, 25F) were never treated.

Abstract: At the time of the interview all subjects had attained final height [mean (SD) -2.3 (0.9) SDS for Dutch references], and the age of the treated subjects was 20.5 (1.0) y, and 25.7 (3.5) y of the control subjects (p < 0.001).

Abstract: The level of education was similar, but the treated subjects had less often a partner compared to the control subjects (adjusted for age and gender, p < 0.001).

Abstract: The Nottingham Health Profile and Short Form 36 Health Survey showed no difference in general health state between treated and control subjects, and the healthy Dutch age-specific references (norm group).

Abstract: Although 74% of the subjects reported one or more negative events related to their height, and 61% would like to be taller, only 22% and 11% were willing to trade-off at Time Trade-Off and Standard Gamble, respectively.

Abstract: The personality of the subjects, which was measured by the Minnesota Multiphasic Personality Inventory, was not different from the norm group.

Abstract: The satisfaction with the rhGH treatment was high, as it had caused 12 (8) cm and 13 (7) cm gain in final height according to the subjects and parents, respectively.

Abstract: Based on initial predicted adult height (Bayley & Pinneau), this gain was only 3.3 (5.6) cm.

Abstract: We concluded that although the treated subjects had a partner less often when compared to the control subjects, the quality of life of subjects with ISS at adult age is normal and appears not to be affected by rhGH therapy, The treated subjects were very satisfied with the treatment, probably by overestimation of the final height gain.


Neighborhood Racial/Ethnic Concentration, Social Disadvantage, and Homicide Risk: An Ecological Analysis of 10 U.S. Cities

Abstract: Homicide is one of the leading causes of death among African-American and Hispanic men.

Abstract: We investigated how neighborhood characteristics associated with social disadvantage explain racial/ethnic homicide gaps in 10 U.S. cities.

Abstract: The test hypotheses were that (1) higher concentrations of African-Americans and Hispanics would be associated with higher homicide rates and (2) the relationship between racial/ethnic concentration and homicide would be attenuated after adjusting for neighborhood characteristics (e.g., unemployment, median household income, low educational attainment, and female headship).

Abstract: The test hypotheses were examined using separate Poisson regression models, which adjusted for spatial autocorrelation.

Abstract: Homicide rates were greater in neighborhoods with higher concentrations of African-Americans and Hispanics than in other groups, and the association of neighborhood racial/ethnic concentration with homicide was reduced after adjusting for neighborhood social disadvantage variables, especially percent female head of household and percent persons with less than a high school education.

Abstract: We also found that the relationship between neighborhood racial/ethnic concentration and homicide was explained more by social disadvantage variables in some cities than in others.

Abstract: Based on our findings, policy makers may wish to consider implementation of policies that (1) expand early childhood education programs and higher education opportunities and (2) encourage economic and community development initiatives in socially disadvantaged neighborhoods.


Preterm patent ductus arteriosus: A continuing conundrum for the neonatologist?

Abstract: How to manage the preterm patent ductus arteriosus (PDA) remains a conundrum.

Abstract: On the one hand, physiology and statistical association with adverse outcomes suggest that it is pathological.

Abstract: On the other hand, clinical trials of treatment strategies have failed to show any long-term benefit.

Abstract: Ultrasound studies of PDA have suggested that the haemodynamic impact may be much earlier after birth than previously thought (in the first hours); however, we still do not know when to treat PDA.

Abstract: Studies that have tested symptomatic or pre-symptomatic treatment are mainly historical and have not tested the effect of no treatment.

Abstract: Prophylactic treatment is the best-studied regimen but improvements in some short-term outcomes do not translate to any difference in longer-term outcomes.

Abstract: Neonatologists have been reluctant to engage in trials that test treatment against almost never treating.

Abstract: Observations of very early postnatal haemodynamic significance suggest that targeting treatment on the basis of the early postnatal constrictive response of the duct may optimize benefits.

Abstract: A pilot trial of this strategy showed reduction in the incidence of pulmonary haemorrhage but more trials of this strategy are needed.


Political and economic aspects of the transition to universal health coverage.

Abstract: Countries have reached universal health coverage by different paths and with varying health systems.

Abstract: Nonetheless, the trajectory toward universal health coverage regularly has three common features.

Abstract: The first is a political process driven by a variety of social forces to create public programmes or regulations that expand access to care, improve equity, and pool financial risks.

Abstract: The second is a growth in incomes and a concomitant rise in health spending, which buys more health services for more people.

Abstract: The third is an increase in the share of health spending that is pooled rather than paid out-of-pocket by households.

Abstract: This pooled share is sometimes mobilised as taxes and channelled through governments that provide or subsidise care--in other cases it is mobilised in the form of contributions to mandatory insurance schemes.

Abstract: The predominance of pooled spending is a necessary condition (but not sufficient) for achieving universal health coverage.

Abstract: This paper describes common patterns in countries that have successfully provided universal access to health care and considers how economic growth, demographics, technology, politics, and health spending have intersected to bring about this major development in public health.


Wedelolactone protects human bronchial epithelial cell injury against cigarette smoke extract-induced oxidant stress and inflammation responses through Nrf2 pathway.

Abstract: Cigarette smoke is the leading cause of the development of various lung diseases including lung cancer through triggering oxidant stress and inflammatory responses which contributed to the lesions of normal human bronchial epithelial (NHBE) cell.

Abstract: Wedelolactone (WEL), a natural compound from Eclipta prostrata L., has been found to possess the inhibitive effects on the proliferation and growth of cancers.

Abstract: In the present study, we investigated the effects of WEL on NHBE cell injury induced by cigarette smoke extract (CSE) in vitro.

Abstract: It showed that the pretreatment WEL (2.5-20μM) resulted in a significant protective effect on 10% CSE-induced cell death in NHBE cells.

Abstract: The pretreatment with WEL dose-dependently and significantly reversed the activities of SOD, CAT, GSH and the level of MDA to normal level.

Abstract: We also found that the protein expression levels of COX-2 and ICAM-1 which are related to inflammatory response were remarkably reduced by WEL compared with 10% CSE treatment.

Abstract: Additionally, WEL also reduced the expressions of antioxidases including NAD(P)H dehydrogenase:Quinone 1 (NQO1) and heme oxygenase-1 (HO-1).

Abstract: Moreover, Nrf2 inhibitor all-trans-retinoic acid (ATRA) decreased remarkably their expressions.

Abstract: These results suggest that WEL protects NHBE cell against CSE-induced injury through modulating Nrf2 pathway.

Abstract: Our study indicates that WEL may be a new potential protective agent against CSE-induced lung injury.


IL-17 promotes tumor development through the induction of tumor promoting microenvironments at tumor sites and myeloid-derived suppressor cells.

Abstract: The role of immune responses in tumor development is a central issue for tumor biology and immunology.

Abstract: IL-17 is an important cytokine for inflammatory and autoimmune diseases.

Abstract: Although IL-17-producing cells are detected in cancer patients and tumor-bearing mice, the role of IL-17 in tumor development is controversial, and mechanisms remain to be fully elucidated.

Abstract: In the current study, we found that the development of tumors was inhibited in IL-17R-deficient mice.

Abstract: A defect in IFN-gammaR increased tumor growth, whereas tumor growth was inhibited in mice that were deficient in both IL-17R and IFN-gammaR compared with wild-type animals.

Abstract: Further experiments showed that neutralization of IL-17 by Abs inhibited tumor growth in wild-type mice, whereas systemic administration of IL-17 promoted tumor growth.

Abstract: The IL-17R deficiency increased CD8 T cell infiltration, whereas it reduced the infiltration of myeloid-derived suppressor cells (MDSCs) in tumors.

Abstract: In contrast, administration of IL-17 inhibited CD8 T cell infiltration and increased MDSCs in tumors.

Abstract: Further analysis indicated that IL-17 was required for the development and tumor-promoting activity of MDSCs in tumor-bearing mice.

Abstract: These data demonstrate that IL-17-mediated responses promote tumor development through the induction of tumor-promoting microenvironments at tumor sites.

Abstract: IL-17-mediated regulation of MDSCs is a primary mechanism for its tumor-promoting effects.

Abstract: The study provides novel insights into the role of IL-17 in tumor development and has major implications for targeting IL-17 in treatment of tumors.


Circulating tumor cells and [18F]fluorodeoxyglucose positron emission tomography/computed tomography for outcome prediction in metastatic breast cancer.

Abstract: PURPOSE Circulating tumor cells (CTCs) and [(18)F]fluorodeoxyglucose (FDG) positron emission tomography (PET)/computed tomography (CT) are two new promising tools for therapeutic monitoring.

Abstract: In this study, we compared the prognostic value of CTC and FDG-PET/CT monitoring during systemic therapy for metastatic breast cancer (MBC).

Abstract: PATIENTS AND METHODS A retrospective analyses of 115 MBC patients who started a new line of therapy and who had CTC counts and FDG-PET/CT scans performed at baseline and at 9 to 12 weeks during therapy (midtherapy) was performed.

Abstract: Patients were categorized according to midtherapy CTC counts as favorable (ie, < five CTCs/7.5 mL blood) or unfavorable (> or = five CTCs/7.5 mL blood) outcomes.

Abstract: CTC counts and FDG-PET/CT response at midtherapy were compared, and univariate and multivariate analyses were performed to identify factors associated with survival.

Abstract: RESULTS In 102 evaluable patients, the median overall survival time was 14 months (range, 1 to > 41 months).

Abstract: Midtherapy CTC levels correlated with FDG-PET/CT response in 68 (67%) of 102 evaluable patients.

Abstract: In univariate analysis, midtherapy CTC counts and FDG-PET/CT response predicted overall survival (P < .001 and P = .001, respectively).

Abstract: FDG-PET/CT predicted overall survival (P = .0086) in 31 (91%) of 34 discordant patients who had fewer than five CTCs at midtherapy.

Abstract: Only midtherapy CTC levels remained significant in a multivariate analysis (P = .004).

Abstract: CONCLUSION Detection of five or more CTCs during therapeutic monitoring can accurately predict prognosis in MBC beyond metabolic response.

Abstract: FDG-PET/CT deserves a role in patients who have fewer than five CTCs at midtherapy.

Abstract: Prospective trials should evaluate the most sensitive and cost-effective modality for therapeutic monitoring in MBC.


Phylogenetic analysis of Portuguese Feline Immunodeficiency Virus sequences reveals high genetic diversity.

Abstract: Feline Immunodeficiency Virus (FIV) is a Lentivirus responsible for an immunodeficiency like disease in domestic cats.

Abstract: Based on the genetic diversity of the V3-V5 region of env gene FIV is divided in five phylogenetic subtypes (A, B, C, D and E) with a world-wide distribution.

Abstract: To understand the subtype diversity of FIV in Portugal a serological survey was conducted during 1 year in the Veterinary Faculty Hospital, Lisbon, Portugal to identify seropositive animals.

Abstract: Two viral genomic regions were amplified by a nested PCR, sequenced and the phylogenetic relationships between 24 new Portuguese FIV sequences and other previously published FIV isolates were assessed.

Abstract: The introduction of these sequences induced a subclustering in subtype B including most of the new Portuguese sequences.

Abstract: Moreover, a new cluster emerged, with two highly divergent new sequences that might represent a new subtype.

Abstract: The study of these new FIV isolates showed the presence in Portugal of a unique viral population subclustering within subtype B and of sequences clearly divergent from the five known subtypes, providing a contribution for the understanding of FIV's genetic diversity.


Aire deficiency promotes TRP-1-specific immune rejection of melanoma.

Abstract: The thymic transcription factor autoimmune regulator (Aire) prevents autoimmunity in part by promoting expression of tissue-specific self-antigens, which include many cancer antigens.

Abstract: For example, AIRE-deficient patients are predisposed to vitiligo, an autoimmune disease of melanocytes that is often triggered by efficacious immunotherapies against melanoma.

Abstract: Therefore, we hypothesized that Aire deficiency in mice may elevate immune responses to cancer and provide insights into how such responses might be triggered.

Abstract: In this study, we show that Aire deficiency decreases thymic expression of TRP-1 (TYRP1), which is a self-antigen in melanocytes and a cancer antigen in melanomas.

Abstract: Aire deficiency resulted in defective negative selection of TRP-1-specific T cells without affecting thymic numbers of regulatory T cells.

Abstract: Aire-deficient mice displayed elevated T-cell immune responses that were associated with suppression of melanoma outgrowth.

Abstract: Furthermore, transplantation of Aire-deficient thymic stroma was sufficient to confer more effective immune rejection of melanoma in an otherwise Aire wild-type host.

Abstract: Together, our work showed how Aire deficiency can enhance immune responses against melanoma and how manipulating TRP-1-specific T-cell negative selection may offer a logical strategy to enhance immune rejection of melanoma.


Mass screening programmes and trends in cervical cancer in Finland and the Netherlands.

Abstract: With respect to cervical cancer management, Finland and the Netherlands are comparable in relevant characteristics, e.g., fertility rate, age-of-mother at first birth and a national screening programme for several years.

Abstract: The aim of this study is to compare trends in incidence of and mortality from cervical cancer in Finland and the Netherlands in relation to the introduction and intensity of the screening programmes.

Abstract: Therefore, incidence and mortality rates were calculated using the Cancer Registries of Finland and the Netherlands.

Abstract: Data on screening intensity were obtained from the Finnish Cancer Registry and the Dutch evaluation centre at ErasmusMC-Rotterdam.

Abstract: Women aged 30-60 have been screened every 5 years, in Finland since 1992 and in the Netherlands since 1996.

Abstract: Screening protocols for smear taking and referral to the gynaecologist are comparable.

Abstract: Incidence and mortality rates have declined more in Finland.

Abstract: In 2003, age-adjusted incidence and mortality in Finland were 4.0 and 0.9 and in the Netherlands 4.9 and 1.4 per 100,000 woman-years, respectively.

Abstract: Excess smear use in the Netherlands was estimated to be 24 per 1,000 women during a 5-year interval compared to 121 in Finland.

Abstract: The decline in mortality in Finland seems to be almost completely related to the screening programme whereas in the Netherlands it was initially considered to be a natural decline.

Abstract: Differences in risk factors might also play a role: the Netherlands has higher population density and higher percentages of immigrants and (female) smokers.

Abstract: The greater excess smear use in Finland might also have affected incidence.


Biochemical characterization of the Ran-RanBP1-RanGAP system: are RanBP proteins and the acidic tail of RanGAP required for the Ran-RanGAP GTPase reaction?

Abstract: RanBP type proteins have been reported to increase the catalytic efficiency of the RanGAP-mediated GTPase reaction on Ran.

Abstract: Since the structure of the Ran-RanBP1-RanGAP complex showed RanBP1 to be located away from the active site, we reinvestigated the reaction using fluorescence spectroscopy under pre-steady-state conditions.

Abstract: We can show that RanBP1 indeed does not influence the rate-limiting step of the reaction, which is the cleavage of GTP and/or the release of product P(i).

Abstract: It does, however, influence the dynamics of the Ran-RanGAP interaction, its most dramatic effect being the 20-fold stimulation of the already very fast association reaction such that it is under diffusion control (4.5 x 10(8) M(-1) s(-1)).

Abstract: Having established a valuable kinetic system for the interaction analysis, we also found, in contrast to previous findings, that the highly conserved acidic C-terminal end of RanGAP is not required for the switch-off reaction.

Abstract: Rather, genetic experiments in Saccharomyces cerevisiae demonstrate a profound effect of the acidic tail on microtubule organization during mitosis.

Abstract: We propose that the acidic tail of RanGAP is required for a process during mitosis.


Concomitant induction of CD4+ and CD8+ T cell responses in volunteers immunized with Salmonella enterica serovar typhi strain CVD 908-htrA.

Abstract: Type 1 cell-mediated immunity might play an important role in protection from typhoid fever.

Abstract: We evaluated whether immunization with Salmonella enterica serovar Typhi (S. Typhi) strain CVD 908-htrA (a Delta aroC Delta aroD Delta htrA mutant), a leading live oral typhoid vaccine candidate, elicits specific CD4(+) and CD8(+) S. Typhi immune responses.

Abstract: Potent CTL responses and IFN-gamma secretion by CD8(+) T cells were detected following immunization with CVD 908-htrA in high (4.5 x 10(8) CFU) and low (5 x 10(7) CFU) dosages.

Abstract: S. Typhi-specific CTL were observed in six of eight vaccinees (four high and two low dose) after immunization.

Abstract: Mean increases in the frequency of IFN-gamma spot-forming cells (SFC) in the presence of S. Typhi-infected targets were 221 +/-

Abstract: 41 SFC/10(6) PBMC and 233 +/-

Abstract: 87 SFC/10(6) PBMC, in the high and low dose groups, respectively.

Abstract: Strong CD4(+) T cell responses were also observed.

Abstract: Increases in the IFN-gamma production to soluble S. Typhi flagella (STF) occurred in 82 and 38% of the volunteers who received the high and low doses, respectively.

Abstract: Robust correlations were observed between volunteers that responded with IFN-gamma SFC to stimulation with S. Typhi-infected cells and IFN-gamma released in response to stimulation with STF Ags (r = 0.822, p < 0.001) and between CTL and IFN-gamma production to STF (r = 0.818, p = 0.013).

Abstract: These data demonstrating the concomitant induction of both CD4- and CD8-mediated CMI are consistent with a significant role for type 1 immunity in controlling typhoid infection and support the continuing evaluation of CVD 908-htrA as a typhoid vaccine candidate.


The diverse functions of GAPDH: views from different subcellular compartments.

Abstract: Multiple roles for glyceraldehyde-3-phosphate dehydrogenase (GAPDH) have been recently appreciated.

Abstract: In addition to the cytoplasm where the majority of GAPDH is located under the basal condition, GAPDH is also found in the particulate fractions, such as the nucleus, the mitochondria, and the small vesicular fractions.

Abstract: When cells are exposed to various stressors, dynamic subcellular re-distribution of GAPDH occurs.

Abstract: Here we review these multifunctional properties of GAPDH, especially linking them to its oligomerization, posttranslational modification, and subcellular localization.

Abstract: This includes mechanistic descriptions of how S-nitrosylation of GAPDH under oxidative stress may lead to cell death/dysfunction via nuclear translocation of GAPDH, which is counteracted by a cytosolic GOSPEL.

Abstract: GAPDH is also involved in various diseases, especially neurodegenerative disorders and cancers.

Abstract: Therapeutic strategies to these conditions based on molecular understanding of GAPDH are discussed.


Exercise-induced asthma: a practical guide to definitions, diagnosis, prevalence, and treatment.

Abstract: Exercise-induced asthma is defined as an intermittent narrowing of the airways, demonstrated by a decrease in some measure of flow, that the patient experiences as wheezing, chest tightness, coughing, and difficulty breathing that is triggered by exercise.

Abstract: Exercise will trigger asthma in most individuals who have chronic asthma, as well as in some who do not otherwise have asthma.

Abstract: Definitive diagnosis requires demonstration of a drop in flow rate, typically > or = 13-15% for forced expiratory volume in one second (FEV1) and > or = 15-20% for peak expiratory flow rate (PEFR), after exercise, associated with symptoms.

Abstract: Prevalence data indicate that this disorder is very common in those who participate in recreational sports as well as in highly competitive athletes, with at least 12-15% of unselected athletes having positive exercise challenges.

Abstract: Treatment of exercise induced asthma involves use of nonpharmacological measures (such as the use of the refractory period after exercise and prewarming air) as well as use of medications (beta-agonists, cromolyn, and nedocromil).

Abstract: With treatment, those who suffer from exercise-induced asthma may be able to participate and compete at the highest levels of performance.


Effect of sample quality on the sensitivity of endoscopic biopsy for detecting gastric and duodenal lesions in dogs and cats.

Abstract: BACKGROUND The quality of histopathology slides of endoscopic biopsies from different laboratories varies, but the effect of biopsy quality on outcome is unknown.

Abstract: HYPOTHESIS The ability to demonstrate a histologic lesion in the stomach or duodenum of a dog or cat is affected by the quality of endoscopic biopsy samples submitted.

Abstract: More endoscopic samples are needed to find a lesion in poor-quality tissue specimens.

Abstract: ANIMALS Tissues from 99 dogs and 51 cats were examined as clinical cases at 8 veterinary institutions or practices in 5 countries.

Abstract: METHODS Histopathology slides from sequential cases that underwent endoscopic biopsy were submitted by participating institutions.

Abstract: Quality of the histologic section of tissue (inadequate, marginal, adequate), type of lesion (lymphangiectasia, crypt lesion, villus blunting, cellular infiltrate), and severity of lesion (normal, mild, moderate, severe) were determined.

Abstract: Sensitivity of different quality tissue samples for finding different lesions was determined.

Abstract: RESULTS Fewer samples were required from dogs for diagnosis as the quality of the sample improved from inadequate to marginal to adequate.

Abstract: Duodenal lesions in cats displayed the same trend except for moderate duodenal infiltrates for which quality of tissue sample made no difference.

Abstract: Gastric lesions in dogs and mild gastric lesions in cats had the same trend, whereas the number of tissue samples needed to diagnose moderately severe gastric lesions in cats was not affected by the quality of tissue sample.

Abstract: CONCLUSIONS AND CLINICAL IMPORTANCE The quality of endoscopically obtained tissue samples has a profound effect on their sensitivity for identifying certain lesions, and there are differences between biopsies of canine and feline tissues.


G-quadruplexes significantly stimulate Pif1 helicase-catalyzed duplex DNA unwinding.

Abstract: The evolutionarily conserved G-quadruplexes (G4s) are faithfully inherited and serve a variety of cellular functions such as telomere maintenance, gene regulation, DNA replication initiation, and epigenetic regulation.

Abstract: Different from the Watson-Crick base-pairing found in duplex DNA, G4s are formed via Hoogsteen base pairing and are very stable and compact DNA structures.

Abstract: Failure of untangling them in the cell impedes DNA-based transactions and leads to genome instability.

Abstract: Cells have evolved highly specific helicases to resolve G4 structures.

Abstract: We used a recombinant nuclear form of Saccharomyces cerevisiae Pif1 to characterize Pif1-mediated DNA unwinding with a substrate mimicking an ongoing lagging strand synthesis stalled by G4s, which resembles a replication origin and a G4-structured flap in Okazaki fragment maturation.

Abstract: We find that the presence of G4 may greatly stimulate the Pif1 helicase to unwind duplex DNA.

Abstract: Further studies reveal that this stimulation results from G4-enhanced Pif1 dimerization, which is required for duplex DNA unwinding.

Abstract: This finding provides new insights into the properties and functions of G4s.

Abstract: We discuss the observed activation phenomenon in relation to the possible regulatory role of G4s in the rapid rescue of the stalled lagging strand synthesis by helping the replicator recognize and activate the replication origin as well as by quickly removing the G4-structured flap during Okazaki fragment maturation.


Diffusion tensor imaging detects and differentiates axon and myelin degeneration in mouse optic nerve after retinal ischemia.

Abstract: Both axon and myelin degeneration have significant impact on the long-term disability of patients with white matter disorder.

Abstract: However, the clinical manifestations of the neurological dysfunction caused by white matter disorders are not sufficient to determine the origin of neurological deficits.

Abstract: A noninvasive biological marker capable of detecting and differentiating axon and myelin degeneration would be a significant addition to currently available tools.

Abstract: Directional diffusivities derived from diffusion tensor imaging (DTI) have been previously proposed by this group as potential biological markers to detect and differentiate axon and myelin degeneration.

Abstract: To further test the hypothesis that axial (lambdaparallel) and radial (lambdaperpendicular) diffusivities reflect axon and myelin pathologies, respectively, the optic nerve was examined serially using DTI in a mouse model of retinal ischemia.

Abstract: A significant decrease of lambdaparallel, the putative DTI axonal marker, was observed 3 days after ischemia without concurrently detectable changes in lambdaperpendicular, the putative myelin marker.

Abstract: This result is consistent with histological findings of significant axonal degeneration with no detectable demyelination at 3 days after ischemia.

Abstract: The elevation of lambdaperpendicular observed 5 days after ischemia is consistent with histological findings of myelin degeneration at this time.

Abstract: These results support the hypothesis that lambdaparallel and lambdaperpendicular hold promise as specific markers of axonal and myelin injury, respectively, and, further, that the coexistence of axonal and myelin degeneration does not confound this utility.


Direct isolation and identification of promoters in the human genome.

Abstract: Transcriptional regulatory elements play essential roles in gene expression during animal development and cellular response to environmental signals, but our knowledge of these regions in the human genome is limited despite the availability of the complete genome sequence.

Abstract: Promoters mark the start of every transcript and are an important class of regulatory elements.

Abstract: A large, complex protein structure known as the pre-initiation complex (PIC) is assembled on all active promoters, and the presence of these proteins distinguishes promoters from other sequences in the genome.

Abstract: Using components of the PIC as tags, we isolated promoters directly from human cells as protein-DNA complexes and identified the resulting DNA sequences using genomic tiling microarrays.

Abstract: Our experiments in four human cell lines uncovered 252 PIC-binding sites in 44 semirandomly selected human genomic regions comprising 1% (30 megabase pairs) of the human genome.

Abstract: Nearly 72% of the identified fragments overlap or immediately flank 5' ends of known cDNA sequences, while the remainder is found in other genomic regions that likely harbor putative promoters of unannotated transcripts.

Abstract: Indeed, molecular analysis of the RNA isolated from one cell line uncovered transcripts initiated from over half of the putative promoter fragments, and transient transfection assays revealed promoter activity for a significant proportion of fragments when they were fused to a luciferase reporter gene.

Abstract: These results demonstrate the specificity of a genome-wide analysis method for mapping transcriptional regulatory elements and also indicate that a small, yet significant number of human genes remains to be discovered.


Attempted suicide in Europe: rates, trends and sociodemographic characteristics of suicide attempters during the period 1989-1992. Results of the WHO/EURO Multicentre Study on Parasuicide.

Abstract: The World Health Organization/EURO Multicentre Project on Parasuicide is part of the action to implement target 12 of the WHO programme, "Health for All by the Year 2000', for the European region.

Abstract: Sixteen centres in 13 European countries are participating in the monitoring aspect of the project, in which trends in the epidemiology of suicide attempts are assessed.

Abstract: The highest average male age-standardized rate of suicide attempts was found for Helsinki, Finland (314/100,000), and the lowest rate (45/100,000) was for Guipuzcoa, Spain, representing a sevenfold difference.

Abstract: The highest average female age-standardized rate was found for Cergy-Pontoise, France (462/100,000), and the lowest (69/100,000) again for Guipuzcoa, Spain.

Abstract: With only one exception (Helsinki), the person-based suicide attempt rates were higher among women than among men.

Abstract: In the majority of centres, the highest person-based rates were found in the younger age groups.

Abstract: The rates among people aged 55 years or over were generally the lowest.

Abstract: For the majority of the centres, the rates for individuals aged 15 years or over decreased between 1989 and 1992.

Abstract: The methods used were primarily "soft' (poisoning) or cutting.

Abstract: More than 50% of the suicide attempters made more than one attempt, and nearly 20% of the second attempts were made within 12 months after the first attempt.

Abstract: Compared with the general population, suicide attempters more often belong to the social categories associated with social destabilization and poverty.


Recurrent outbreaks of Salmonella Enteritidis infections in a Texas restaurant: phage type 4 arrives in the United States.

Abstract: In recent years infection caused by Salmonella serotype Enteritidis (SE) phage type 4 has spread through Europe but has been uncommon in the USA.

Abstract: The first recognized outbreak of this strain in the USA occurred in a Chinese restaurant in EI Paso, Texas, in April 1993; no source was identified.

Abstract: In September 1993, a second outbreak caused by SE phage type 4 was associated with the same restaurant.

Abstract: To determine the cause of the second outbreak, we compared food exposures of the 19 patients with that of two control groups.

Abstract: Egg rolls were the only item significantly associated with illness in both analyses (first control group: odds ratio [OR] 8.2, 95% confidence interval [CI] 2.3-31.6; second control group: OR 13.1, 95% CI 2.1-97.0).

Abstract: Retrospective analysis of the April outbreak also implicated egg rolls (OR 32.4, 95% CI 9.1-126.6).

Abstract: Egg roll batter was made from pooled shell eggs and was left at room temperature throughout the day.

Abstract: These two outbreaks of SE phage type 4 likely could have been prevented by using pasteurized eggs and safe food preparation practices.


Strand-specific mismatch correction in nuclear extracts of human and Drosophila melanogaster cell lines.

Abstract: Nuclear extracts derived from HeLa and Drosophila melanogaster KC cell lines have been found to correct single base-base mispairs within open circular DNA heteroduplexes containing a strand-specific, site-specific incision located 808 base pairs from the mismatch.

Abstract: Correction in both extract systems is strand specific, being highly biased to the incised DNA strand.

Abstract: Different mispairs within a homologous set of heteroduplexes were processed with different efficiencies (G.T greater than G.G approximately equal to A.C greater than C.C), and correction was accompanied by mismatch-dependent DNA synthesis localized to the region spanning the mispair and the strand break, thus demonstrating that mismatch recognition is associated with the repair reaction.

Abstract: Correction of each of these heteroduplexes was abolished by aphidicolin but was relatively insensitive to the presence of high concentrations of ddTTP, indicating probable involvement of alpha and/or delta class DNA polymerase(s).

Abstract: These findings suggest that higher eukaryotic cells possess a general, strand-specific mismatch repair system analogous to the Escherichia coli mutHLS and the Streptococcus pneumoniae hexAB pathways, systems that contribute in a major way to the genetic stability of these bacterial species.


Renal outcomes with telmisartan, ramipril, or both, in people at high vascular risk (the ONTARGET study): a multicentre, randomised, double-blind, controlled trial.

Abstract: BACKGROUND Angiotensin receptor blockers (ARB) and angiotensin converting enzyme (ACE) inhibitors are known to reduce proteinuria.

Abstract: Their combination might be more effective than either treatment alone, but long-term data for comparative changes in renal function are not available.

Abstract: We investigated the renal effects of ramipril (an ACE inhibitor), telmisartan (an ARB), and their combination in patients aged 55 years or older with established atherosclerotic vascular disease or with diabetes with end-organ damage.

Abstract: METHODS The trial ran from 2001 to 2007.

Abstract: After a 3-week run-in period, 25 620 participants were randomly assigned to ramipril 10 mg a day (n=8576), telmisartan 80 mg a day (n=8542), or to a combination of both drugs (n=8502; median follow-up was 56 months), and renal function and proteinuria were measured.

Abstract: The primary renal outcome was a composite of dialysis, doubling of serum creatinine, and death.

Abstract: Analysis was by intention to treat.

Abstract: This study is registered with ClinicalTrials.gov, number NCT00153101.

Abstract: FINDINGS 784 patients permanently discontinued randomised therapy during the trial because of hypotensive symptoms (406 on combination therapy, 149 on ramipril, and 229 on telmisartan).

Abstract: The number of events for the composite primary outcome was similar for telmisartan (n=1147 [13.4%]) and ramipril (1150 [13.5%]; hazard ratio [HR] 1.00, 95% CI 0.92-1.09), but was increased with combination therapy (1233 [14.5%]; HR 1.09, 1.01-1.18, p=0.037).

Abstract: The secondary renal outcome, dialysis or doubling of serum creatinine, was similar with telmisartan (189 [2.21%]) and ramipril (174 [2.03%]; HR 1.09, 0.89-1.34) and more frequent with combination therapy (212 [2.49%]: HR 1.24, 1.01-1.51, p=0.038).

Abstract: Estimated glomerular filtration rate (eGFR) declined least with ramipril compared with telmisartan (-2.82 [SD 17.2] mL/min/1.73 m(2)vs -4.12 [17.4], p<0.0001) or combination therapy (-6.11 [17.9], p<0.0001).

Abstract: The increase in urinary albumin excretion was less with telmisartan (p=0.004) or with combination therapy (p=0.001) than with ramipril.

Abstract: INTERPRETATION In people at high vascular risk, telmisartan's effects on major renal outcomes are similar to ramipril.

Abstract: Although combination therapy reduces proteinuria to a greater extent than monotherapy, overall it worsens major renal outcomes.


Hypothermic preservation up-regulates calpain expression and increases ubiquitination in cultured vascular endothelial cells: influence of dopamine pretreatment.

Abstract: BACKGROUND Prolonged hypothermia, as occurs during solid organ transplantation, negatively influences transplantation outcome.

Abstract: Proteolysis is one of the deleterious events implicated in preservation injury of organ allografts.

Abstract: This strongly affects graft quality and hence immediate organ function.

Abstract: Since donor catecholamine treatment improves transplantation outcome after renal transplantation, the present study was conducted to examine the influence of dopamine (DA) pretreatment on hypothermia induced proteolysis in endothelial cells subjected to prolonged cold storage.

Abstract: MATERIALS AND METHODS Lactate dehydrogenase (LDH) assay, two-dimensional electrophoresis, ubiquitination analysis, intracellular calcium measurement, and Western blot analysis were performed on human umbilical vein endothelial cells (HUVEC) subjected to hypothermic preservation or not.

Abstract: RESULTS HUVEC were highly susceptible to cold storage, which was reflected by morphological changes, loss of viability, and by significant changes in cellular proteome.

Abstract: DA pretreatment prevented cell death during cold storage.

Abstract: Western blot analysis demonstrated a time dependent up-regulation of calpain 1 and 2 during cold storage, which could be prevented by addition of EDTA.

Abstract: DA pretreatment abolished autoproteolysis of calpain 1.

Abstract: Analysis of ubiquitination revealed a significant increase in ubiquitinated conjugates after cold storage.

Abstract: This was not prevented by DA pretreatment.

Abstract: Neither proteasome nor calpain inhibitors prevented cell death during cold storage.

Abstract: CONCLUSION In endothelial cells subjected to cold preservation, activation of the calpain pathway and the ubiquitin proteasome system occur.

Abstract: Although DA pretreatment inhibits the former, calpain inhibition did not protect endothelial cells during cold storage.

Abstract: DA pretreatment might influence proteolysis, but proteolysis is not the major cause of endothelial cell death.


The three 'C' s of chromosome conformation capture: controls, controls, controls

Abstract: Transcription regulation in higher eukaryotes is controlled by regulatory elements such as enhancers that are recognized by transcription factors.

Abstract: In many cases regulatory elements can be located at distances up to several megabases from their target genes.

Abstract: Recent evidence shows that long-range control of gene expression can be mediated through direct physical interactions between genes and these regulatory elements.

Abstract: Such looping interactions can be detected using the chromosome conformation capture (3C) methodology.

Abstract: Although 3C is experimentally straightforward, to draw meaningful conclusions one must carefully design 3C experiments and implement the conscientious use of controls.

Abstract: The general guidelines presented here should help experimental design and minimize misinterpretation of 3C experiments.


Effects of exercise training of 8 weeks and detraining on plasma levels of endothelium-derived factors, endothelin-1 and nitric oxide, in healthy young humans.

Abstract: Vascular endothelial cells produce nitric oxide (NO), which is a potent vasodilator substance and has been proposed as having antiatherosclerotic property.

Abstract: Vascular endothelial cells also produce endothelin-1 (ET-1), which is a potent vasoconstrictor peptide and has potent proliferating activity on vascular smooth muscle cells.

Abstract: Therefore, ET-1 has been implicated in the progression of atheromatous vascular disease.

Abstract: Because exercise training has been reported to produce an alteration in the function of vascular endothelial cells in animals, we hypothesized that exercise training influences the production of NO and ET-1 in humans.

Abstract: The purpose of the present study was to examine whether chronic exercise could influence the plasma levels of NO (measured as the stable end product of NO, i.e., nitrite/nitrate [NOx]) and ET-1 in humans.

Abstract: Eight healthy young subjects (20.3 +/-

Abstract: 0.5 yr old) participated in the study and exercised by cycling on a leg ergometer (70% VO2max for 1 hour, 3-4 days/week) for 8 weeks.

Abstract: Venous plasma concentrations of NOx and ET-1 were measured before and after (immediately before the end of 8-week exercise training) the exercise training, and also after the 4th and 8th week after the cessation of training.

Abstract: The VO2max significantly increased after exercise training.

Abstract: After the exercise training, the plasma concentration of NOx significantly increased (30.69 +/-

Abstract: 3.20 vs. 48.64 +/-

Abstract: 8.16 micromol/L, p < 0.05), and the plasma concentration of ET-1 significantly decreased (1.65 +/- 0.14 vs. 1.23 +/-

Abstract: 0.12 pg/mL, p < 0.05).

Abstract: The increase in NOx level and the decrease in ET-1 level lasted to the 4th week after the cessation of exercise training and these levels (levels of NOx and ET-1) returned to the basal levels (the levels before the exercise training) in the 8th week after the cessation of exercise training.

Abstract: There was a significant negative correlation between plasma NOx concentration and plasma ET-1 concentration.

Abstract: The present study suggests that chronic exercise causes an increase in production of NO and a decrease in production of ET-1 in humans, which may produce beneficial effects (i.e., vasodilative and antiatherosclerotic) on the cardiovascular system.


Neuron-specific expression of CuZnSOD prevents the loss of muscle mass and function that occurs in homozygous CuZnSOD-knockout mice.

Abstract: Deletion of copper-zinc superoxide dismutase (CuZnSOD) in Sod1(-/-) mice leads to accelerated loss of muscle mass and force during aging, but the losses do not occur with muscle-specific deletion of CuZnSOD.

Abstract: To determine the role of motor neurons in the muscle decline, we generated transgenic Sod1(-/-) mice in which CuZnSOD was expressed under control of the synapsin 1 promoter (SynTgSod1(-/-) mice).

Abstract: SynTgSod1(-/-) mice expressed CuZnSOD in brain, spinal cord, and peripheral nerve, but not in other tissues.

Abstract: Sciatic nerve CuZnSOD content in SynTgSod1(-/-) mice was ~20% that of control mice, but no reduction in muscle mass or isometric force was observed in SynTgSod1(-/-) mice compared with control animals, whereas muscles of age-matched Sod1(-/-) mice displayed 30-40% reductions in mass and force.

Abstract: In addition, increased oxidative damage and adaptations in stress responses observed in muscles of Sod1(-/-) mice were absent in SynTgSod1(-/-) mice, and degeneration of neuromuscular junction (NMJ) structure and function occurred in Sod1(-/-) mice but not in SynTgSod1(-/-) mice.

Abstract: Our data demonstrate that specific CuZnSOD expression in neurons is sufficient to preserve NMJ and skeletal muscle structure and function in Sod1(-/-) mice and suggest that redox homeostasis in motor neurons plays a key role in initiating sarcopenia during aging.


A developmental transition in definitive erythropoiesis: erythropoietin expression is sequentially regulated by retinoic acid receptors and HNF4.

Abstract: The cytokine erythropoietin (Epo) promotes erythropoietic progenitor cell proliferation and is required for erythropoietic differentiation.

Abstract: We have found that the Epo gene is a direct transcriptional target gene of retinoic acid signaling during early erythropoiesis (prior to embryonic day E12.5) in the fetal liver.

Abstract: Mouse embryos lacking the retinoic acid receptor gene RXR alpha have a morphological and histological phenotype that is comparable with embryos in which the Epo gene itself has been mutated, and flow cytometric analysis indicates that RXR alpha-deficient embryos are deficient in erythroid differentiation.

Abstract: Epo mRNA levels are reduced substantially in the fetal livers of RXR alpha(-/-) embryos at E10.25 and E11.25, and genetic analysis shows that the RXR alpha and Epo genes are coupled in the same pathway.

Abstract: We furthermore show that the Epo gene is retinoic acid inducible in embryos, and that the Epo gene enhancer contains a DR2 sequence that represents a retinoic acid receptor-binding site and a retinoic acid receptor transcriptional response element.

Abstract: However, unlike Epo-deficient embryos that die from anemia, the erythropoietic deficiency in RXR alpha(-/-) embryos is transient; Epo mRNA is expressed at normal levels by E12.5, and erythropoiesis and liver morphology are normal by E14.5.

Abstract: We show that HNF4, like RXR alpha a member of the nuclear receptor family, is abundantly expressed in fetal liver hepatocytes, and is competitive with retinoic acid receptors for occupancy of the Epo gene enhancer DR2 element.

Abstract: We propose that Epo expression is regulated during the E9.5--E11.5 phase of fetal liver erythropoiesis by RXR alpha and retinoic acid, and that expression then becomes dominated by HNF4 activity from E11.5 onward.

Abstract: This transition may be responsible for switching regulation of Epo expression from retinoic acid control to hypoxic control, as is found throughout the remainder of life.


Tetraspanin 7 (TSPAN7) expression is upregulated in multiple myeloma patients and inhibits myeloma tumour development in vivo.

Abstract: BACKGROUND Increased expression of the tetraspanin TSPAN7 has been observed in a number of cancers; however, it is unclear how TSPAN7 plays a role in cancer progression.

Abstract: METHODS We investigated the expression of TSPAN7 in the haematological malignancy multiple myleoma (MM) and assessed the consequences of TSPAN7 expression in the adhesion, migration and growth of MM plasma cells (PC) in vitro and in bone marrow (BM) homing and tumour growth in vivo.

Abstract: Finally, we characterised the association of TSPAN7 with cell surface partner molecules in vitro.

Abstract: RESULTS TSPAN7 was found to be highly expressed at the RNA and protein level in CD138(+) MM PC from approximately 50% of MM patients.

Abstract: TSPAN7 overexpression in the murine myeloma cell line 5TGM1 significantly reduced tumour burden in 5TGM1/KaLwRij mice 4 weeks after intravenous adminstration of 5TGM1 cells.

Abstract: While TSPAN7 overexpression did not affect cell proliferation in vitro, TSPAN7 increased 5TGM1 cell adhesion to BM stromal cells and transendothelial migration.

Abstract: In addition, TSPAN7 was found to associate with the molecular chaperone calnexin on the cell surface.

Abstract: CONCLUSION These results suggest that elevated TSPAN7 may be associated with better outcomes for up to 50% of MM patients.


Association of body mass index with outcomes in patients with CKD.

Abstract: Obesity is associated with higher mortality in the general population, but this association is reversed in patients on dialysis.

Abstract: The nature of the relationship of obesity with adverse clinical outcomes in nondialysis-dependent CKD and the putative interaction of the severity of disease with this association are unclear.

Abstract: We analyzed data from a nationally representative cohort of 453,946 United States veterans with eGFR<60 ml/min per 1.73 m(2).

Abstract: The associations of body mass index categories (<20, 20 to <25, 25 to <30, 30 to <35, 35 to <40, 40 to <45, 45 to <50, and ≥50 kg/m(2)) with all-cause mortality and disease progression (using multiple definitions, including incidence of ESRD, doubling of serum creatinine, and the slopes of eGFR) were examined in Cox proportional hazards models and logistic regression models.

Abstract: Multivariable adjustments were made for age, race, comorbidities and medications, and baseline eGFR.

Abstract: Body mass index showed a relatively consistent U-shaped association with clinical outcomes, with the best outcomes observed in overweight and mildly obese patients.

Abstract: Body mass index levels <25 kg/m(2) were associated with worse outcomes in all patients, independent of severity of CKD.

Abstract: Body mass index levels ≥35 kg/m(2) were associated with worse outcomes in patients with earlier stages of CKD, but this association was attenuated in those patients with eGFR<30 ml/min per 1.73 m(2).

Abstract: Thus, until clinical trials establish the ideal body mass index, a cautious approach to weight management is warranted in this patient population.


WRN, the protein deficient in Werner syndrome, plays a critical structural role in optimizing DNA repair.

Abstract: Werner syndrome (WS) predisposes patients to cancer and premature aging, owing to mutations in WRN.

Abstract: The WRN protein is a RECQ-like helicase and is thought to participate in DNA double-strand break (DSB) repair by non-homologous end joining (NHEJ) or homologous recombination (HR).

Abstract: It has been previously shown that non-homologous DNA ends develop extensive deletions during repair in WS cells, and that this WS phenotype was complemented by wild-type (wt) WRN.

Abstract: WRN possesses both 3' --> 5' exonuclease and 3' --> 5' helicase activities.

Abstract: To determine the relative contributions of each of these distinct enzymatic activities to DSB repair, we examined NHEJ and HR in WS cells (WRN-/-) complemented with either wtWRN, exonuclease-defective WRN (E-), helicase-defective WRN (H-) or exonuclease/helicase-defective WRN (E-H-).

Abstract: The single E-and H- mutants each partially complemented the NHEJ abnormality of WRN-/- cells.

Abstract: Strikingly, the E-H- double mutant complemented the WS deficiency nearly as efficiently as did wtWRN.

Abstract: Similarly, the double mutant complemented the moderate HR deficiency of WS cells nearly as well as did wtWRN, whereas the E- and H- single mutants increased HR to levels higher than those restored by either E-H- or wtWRN.

Abstract: These results suggest that balanced exonuclease and helicase activities of WRN are required for optimal HR.

Abstract: Moreover, WRN appears to play a structural role, independent of its enzymatic activities, in optimizing HR and efficient NHEJ repair.

Abstract: Another human RECQ helicase, BLM, suppressed HR but had little or no effect on NHEJ, suggesting that mammalian RECQ helicases have distinct functions that can finely regulate recombination events.


In vitro generated antibodies specific for telomeric guanine-quadruplex DNA react with Stylonychia lemnae macronuclei.

Abstract: Most eukaryotic telomeres contain a repeating motif with stretches of guanine residues that form a 3'-terminal overhang extending beyond the telomeric duplex region.

Abstract: The telomeric repeat of hypotrichous ciliates, d(T(4)G(4)), forms a 16-nucleotide 3'-overhang.

Abstract: Such sequences can adopt parallel-stranded as well as antiparallel-stranded quadruplex conformations in vitro.

Abstract: Although it has been proposed that guanine-quadruplex conformations may have important cellular roles including telomere function, recombination, and transcription, evidence for the existence of this DNA structure in vivo has been elusive to date.

Abstract: We have generated high-affinity single-chain antibody fragment (scFv) probes for the guanine-quadruplex formed by the Stylonychia telomeric repeat, by ribosome display from the Human Combinatorial Antibody Library.

Abstract: Of the scFvs selected, one (Sty3) had an affinity of K(d) = 125 pM for the parallel-stranded guanine-quadruplex and could discriminate with at least 1,000-fold specificity between parallel or antiparallel quadruplex conformations formed by the same sequence motif.

Abstract: A second scFv (Sty49) bound both the parallel and antiparallel quadruplex with similar (K(d) = 3--5 nM) affinity.

Abstract: Indirect immunofluorescence studies show that Sty49 reacts specifically with the macronucleus but not the micronucleus of Stylonychia lemnae.

Abstract: The replication band, the region where replication and telomere elongation take place, was also not stained, suggesting that the guanine-quadruplex is resolved during replication.

Abstract: Our results provide experimental evidence that the telomeres of Stylonychia macronuclei adopt in vivo a guanine-quadruplex structure, indicating that this structure may have an important role for telomere functioning.


Incidence of skin cancer after renal transplantation in The Netherlands.

Abstract: The incidence of squamous cell carcinoma (SCC) and basal cell carcinoma (BCC) was analyzed separately in all 764 patients who received a renal allograft between 1966 and 1988 at the Leiden University Hospital.

Abstract: The mean follow-up period was 8.7 posttransplant years (range 1-21 years).

Abstract: During this time period 176 skin cancers were diagnosed in 47 patients.

Abstract: The overall risk to develop a first tumor increased from 10% after 10 years to 40% after 20 years of graft survival.

Abstract: The overall incidence of SCC was 250 times higher and that of BCC 10 times higher when compared with the general Dutch population.

Abstract: Moreover the localization of SCCs and BCCs differed considerably.

Abstract: Solar radiation is thought to be an important risk factor for the development of skin cancer.

Abstract: However, the occurrence of skin cancer in long-term graft survivors forms also a major problem in a country with a higher geographical latitude and a moderate amount of sun-exposure, such as the Netherlands.


Myogenic and morphogenetic defects in the heart tubes of murine embryos lacking the homeo box gene Nkx2-5.

Abstract: The murine homeo box gene Nkx2-5 is expressed in precardiac mesoderm and in the myocardium of embryonic and fetal hearts.

Abstract: Targeted interruption of Nkx2-5 resulted in abnormal heart morphogenesis, growth retardation and embryonic lethality at approximately 9-10 days postcoitum (p.c.).

Abstract: Heart tube formation occurred normally in mutant embryos, but looping morphogenesis, a critical determinant of heart form, was not initiated at the linear heart tube stage (8.25-8.5 days p.c.).

Abstract: Commitment to the cardiac muscle lineage, expression of most myofilament genes and myofibrillogenesis were not compromised.

Abstract: However, the myosin light-chain 2V gene (MLC2V) was not expressed in mutant hearts nor in mutant ES cell-derived cardiocytes.

Abstract: MLC2V expression normally occurs only in ventricular cells and is the earliest known molecular marker of ventricular differentiation.

Abstract: The regional expression in mutant hearts of two other ventricular markers, myosin heavy-chain beta and cyclin D2, indicated that not all ventricle-specific gene expression is dependent on Nkx2-5.

Abstract: The data demonstrate that Nkx2-5 is essential for normal heart morphogenesis, myogenesis, and function.

Abstract: Furthermore, this gene is a component of a genetic pathway required for myogenic specialization of the ventricles.


Hygiene hypothesis in inflammatory bowel disease: a critical review of the literature.

Abstract: The hygiene hypothesis is thought to be a significant contributor to the growing incidence of inflammatory bowel disease (IBD) around the world, although the evidence for specific factors that underlie the hygiene hypothesis in IBD is unclear.

Abstract: We aimed to systematically review the literature to determine which hygiene-related factors are associated with the development of IBD.

Abstract: Publications identified from a broad based MEDLINE and Current Contents search between 1966 and 2007 on key terms relevant to the 'hygiene hypothesis' and IBD including H pylori exposure, helminths, cold chain hypothesis, measles infection and vaccination, antibiotic use, breastfeeding, family size, sibship, urban upbringing, day care attendance and domestic hygiene were reviewed.

Abstract: The literature suggests that the hygiene hypothesis and its association with decreased microbial exposure in childhood probably plays an important role in the development of IBD, although the strength of the supporting data for each of the factors varies considerably.

Abstract: The most promising factors that may potentially be associated with development of IBD include H pylori exposure, helminths, breastfeeding and sibship.

Abstract: However, the vast majority of studies in this area are plagued by serious methodological shortcomings, particularly the reliance on retrospective recall of information making it difficult to truly ascertain the importance of a 'hygiene hypothesis' in IBD.

Abstract: The 'hygiene hypothesis' in IBD is an important area of research that may give clues to the aetiology of this disease.

Abstract: Directions for future research are recommended.


Are dual eligibles admitted to poorer quality skilled nursing facilities?

Abstract: BACKGROUND Dual eligibles, persons who qualify for both Medicare and Medicaid coverage, often receive poorer quality care relative to other Medicare beneficiaries.

Abstract: OBJECTIVES To determine whether dual eligibles are discharged to lower quality post-acute skilled nursing facilities (SNFs) compared with Medicare-only beneficiaries.

Abstract: RESEARCH DESIGN Following the random utility maximization model, we specified a discharge function using a conditional logit model and tested how this discharge rule varied by dual-eligibility status.

Abstract: SUBJECTS A total of 692,875 Medicare fee-for-service patients (22% duals) who were discharged for Medicare paid SNF care between July 2004 and June 2005.

Abstract: MEASURES Medicare enrollment and the Medicaid Analytic Extract files were used to determine dual eligibility.

Abstract: The proportion of Medicaid patients and nursing staff characteristics provided measures of SNF quality.

Abstract: RESULTS Duals are more likely to be discharged to SNFs with a higher share of Medicaid patients and fewer nurses.

Abstract: These results are robust to estimation with an alternative subsample of patients based on primary diagnoses, propensity of being dual eligible, and likelihood of remaining in the nursing home.

Abstract: CONCLUSIONS Disparities exist in access to quality SNF care for duals.

Abstract: Strategies to improve discharge planning processes are required to redirect patients to higher quality providers, regardless of Medicaid eligibility.


Quantitative phosphoproteomic analysis of acquired cancer drug resistance to pazopanib and dasatinib

Abstract: Acquired drug resistance impacts the majority of patients being treated with tyrosine kinase inhibitors (TKIs) and remains a key challenge in modern anti-cancer therapy.

Abstract: The lack of clinically effective therapies to overcome resistance represents an unmet need.

Abstract: Understanding the signalling that drives drug resistance will facilitate the development of new salvage therapies to treat patients with secondary TKI resistance.

Abstract: In this study, we utilise mass spectrometry to characterise the global phosphoproteomic alterations that accompany the acquisition of resistance to two FDA-approved TKIs, pazopanib and dasatinib, in the A204 rhabdoid tumour cell line.

Abstract: Our analysis finds that only 6% and 9.7% of the quantified phosphoproteome is altered upon the acquisition of pazopanib and dasatinib resistance, respectively.

Abstract: Pazopanib resistant cells display elevated phosphorylation in cytoskeletal regulatory pathways while dasatinib resistant cells show an upregulation of the insulin receptor/IGF-1R signalling pathway.

Abstract: Drug response profiling rediscovers several previously reported vulnerabilities associated with pazopanib and dasatinib resistance and identifies a new dependency to the second generation HSP90 inhibitor NVP-AUY-922.

Abstract: This study provides a useful resource detailing the candidate signalling determinants of acquired TKI resistance; and reveals a therapeutic approach of inhibiting HSP90 function as a means of salvage therapy to overcome pazopanib and dasatinib resistance.

Abstract: SIGNIFICANCE Pazopanib and dasatinib are tyrosine kinase inhibitors (TKIs) approved for the treatment of multiple cancer types.

Abstract: Patients who are treated with these drugs are prone to the development of drug resistance and consequently tumour relapse.

Abstract: Here we use quantitative phosphoproteomics to characterise the signalling pathways which are enriched in cells that have acquired resistance to these two drugs.

Abstract: Furthermore, targeted drug screens were used to identify salvage therapies capable of overcoming pazopanib and dasatinib resistance.

Abstract: This data advances our understanding of the mechanisms of TKI resistance and highlights candidate targets for cancer therapy.


Pandemic H1N12009 influenza and HIV: a review of natural history, management and vaccine immunogenicity.

Abstract: PURPOSE OF REVIEW The 2009 pandemic HIN1 influenza strain (H1N12009) produced more severe disease and increased risk for mortality.

Abstract: As an at-risk population for more severe influenza illness, particular concern regarding HIV patients triggered a focused effort to evaluate disease burden and vaccine efficacy in these populations.

Abstract: RECENT FINDINGS As with other immune-compromised individuals, most HIV-infected individuals recovered without major consequence.

Abstract: Although HIV infection was assumed to be a risk factor for more severe disease and death, the published literature does not indicate this to be so.

Abstract: Neuraminadase inhibitors were well tolerated by this population and there was no evidence of clinically significant pharmacokinetic interactions with antiretroviral therapy.

Abstract: Immunogenicity was increased with H1N12009 vaccine compared to the historical results of nonpandemic vaccines and optimized by the use of adjuvants.

Abstract: Booster dosing was also of benefit.

Abstract: H1N12009 vaccine was generally well tolerated without evidence of detrimental effect on HIV status.

Abstract: SUMMARY The worse case scenario was not realized for H1N12009 in the general population or in those with HIV.

Abstract: Immunization with adjuvant represents a key measure to protect this population from H1N12009 and other future novel influenza strains.


Population genomics of the honey bee reveals strong signatures of positive selection on worker traits.

Abstract: Most theories used to explain the evolution of eusociality rest upon two key assumptions: mutations affecting the phenotype of sterile workers evolve by positive selection if the resulting traits benefit fertile kin, and that worker traits provide the primary mechanism allowing social insects to adapt to their environment.

Abstract: Despite the common view that positive selection drives phenotypic evolution of workers, we know very little about the prevalence of positive selection acting on the genomes of eusocial insects.

Abstract: We mapped the footprints of positive selection in Apis mellifera through analysis of 40 individual genomes, allowing us to identify thousands of genes and regulatory sequences with signatures of adaptive evolution over multiple timescales.

Abstract: We found Apoidea- and Apis-specific genes to be enriched for signatures of positive selection, indicating that novel genes play a disproportionately large role in adaptive evolution of eusocial insects.

Abstract: Worker-biased proteins have higher signatures of adaptive evolution relative to queen-biased proteins, supporting the view that worker traits are key to adaptation.

Abstract: We also found genes regulating worker division of labor to be enriched for signs of positive selection.

Abstract: Finally, genes associated with worker behavior based on analysis of brain gene expression were highly enriched for adaptive protein and cis-regulatory evolution.

Abstract: Our study highlights the significant contribution of worker phenotypes to adaptive evolution in social insects, and provides a wealth of knowledge on the loci that influence fitness in honey bees.


An acetylation switch in p53 mediates holo-TFIID recruitment.

Abstract: Posttranslational modifications mediate important regulatory functions in biology.

Abstract: The acetylation of the p53 transcription factor, for example, promotes transcriptional activation of target genes including p21.

Abstract: Here we show that the acetylation of two lysine residues in p53 promotes recruitment of the TFIID subunit TAF1 to the p21 promoter through its bromodomains.

Abstract: UV irradiation of cells diacetylates p53 at lysines 373 and 382, which in turn recruits TAF1 to a distal p53-binding site on the p21 promoter prior to looping to the core promoter.

Abstract: Disruption of acetyl-p53/bromodomain interaction inhibits TAF1 recruitment to both the distal p53-binding site and the core promoter.

Abstract: Further, the TFIID subunits TAF4, TAF5, and TBP are detected on the core promoter prior to TAF1, suggesting that, upon DNA damage, distinct subunits of TFIID may be recruited separately to the p21 promoter and that the transcriptional activation depends on posttranslational modification of the p53 transcription factor.


Dasatinib inhibits both osteoclast activation and prostate cancer PC-3-cell-induced osteoclast formation.

Abstract: PURPOSE Therapies to target prostate cancer bone metastases have only limited effects.

Abstract: New treatments are focused on the interaction between cancer cells, bone marrow cells and the bone matrix.

Abstract: Osteoclasts play an important role in the development of bone tumors caused by prostate cancer.

Abstract: Since Src kinase has been shown to be necessary for osteoclast function, we hypothesized that dasatinib, a Src family kinase inhibitor, would reduce osteoclast activity and prostate cancer (PC-3) cell-induced osteoclast formation.

Abstract: RESULTS Dasatinib inhibited RANKL-induced osteoclast differentiation of bone marrow-derived monocytes with an EC(50) of 7.5 nM. PC-3 cells, a human prostate cancer cell line, were able to differentiate RAW 264.7 cells, a murine monocytic cell line, into osteoclasts, and dasatinib inhibited this differentiation.

Abstract: In addition, conditioned medium from PC-3 cell cultures was able to differentiate RAW 264.7 cells into osteoclasts and this too, was inhibited by dasatinib.

Abstract: Even the lowest concentration of dasatinib, 1.25 nmol, inhibited osteoclast differentiation by 29%.

Abstract: Moreover, dasatinib inhibited osteoclast activity by 58% as measured by collagen 1 release.

Abstract: EXPERIMENTAL DESIGN We performed in vitro experiments utilizing the Src family kinase inhibitor dasatinib to target osteoclast activation as a means of inhibiting prostate cancer bone metastases.

Abstract: CONCLUSION Dasatinib inhibits osteoclast differentiation of mouse primary bone marrow-derived monocytes and PC-3 cell-induced osteoclast differentiation.

Abstract: Dasatinib also inhibits osteoclast degradation activity.

Abstract: Inhibiting osteoclast differentiation and activity may be an effective targeted therapy in patients with prostate cancer bone metastases.