Candida albicans-Staphylococcus aureus polymicrobial peritonitis modulates host innate immunity.

Abstract: Despite advances in medical device fabrication and antimicrobial treatment therapies, fungal-bacterial polymicrobial peritonitis remains a serious complication for surgery patients, those on peritoneal dialysis, and the critically ill.

Abstract: Using a murine model of peritonitis, we have demonstrated that monomicrobial infection with Candida albicans or Staphylococcus aureus is nonlethal.

Abstract: However, coinfection with these same doses leads to a 40% mortality rate and increased microbial burden in the spleen and kidney by day 1 postinfection.

Abstract: Using a multiplex enzyme-linked immunosorbent assay, we have also identified a unique subset of innate proinflammatory cytokines (interleukin-6, granulocyte colony-stimulating factor, keratinocyte chemoattractant, monocyte chemoattractant protein-1, and macrophage inflammatory protein-1α) that are significantly increased during polymicrobial versus monomicrobial peritonitis, leading to increased inflammatory infiltrate into the peritoneum and target organs.

Abstract: Treatment of coinfected mice with the cyclooxygenase (COX) inhibitor indomethacin reduces the infectious burden, proinflammatory cytokine production, and inflammatory infiltrate while simultaneously preventing any mortality.

Abstract: Further experiments demonstrated that the immunomodulatory eicosanoid prostaglandin E2 (PGE2) is synergistically increased during coinfection compared to monomicrobial infection; indomethacin treatment also decreased elevated PGE2 levels.

Abstract: Furthermore, addition of exogenous PGE2 into the peritoneal cavity during infection overrode the protection provided by indomethacin and restored the increased mortality and microbial burden.

Abstract: Importantly, these studies highlight the ability of fungal-bacterial coinfection to modulate innate inflammatory events with devastating consequences to the host.


Techniques and probes for the study of Xenopus tropicalis development.

Abstract: The frog Xenopus laevis has provided significant insights into developmental and cellular processes.

Abstract: However, X. laevis has an allotetraploid genome precluding its use in forward genetic analysis.

Abstract: Genetic analysis may be applicable to Xenopus (Silurana) tropicalis, which has a diploid genome and a shorter generation time.

Abstract: Here, we show that many tools for the study of X. laevis development can be applied to X. tropicalis.

Abstract: By using the developmental staging system of Nieuwkoop and Faber, we find that X. tropicalis embryos develop at similar rates to X. laevis, although they tolerate a narrower range of temperatures.

Abstract: We also show that many of the analytical reagents available for X. laevis can be effectively transferred to X. tropicalis.

Abstract: The X. laevis protocol for whole-mount in situ hybridization to mRNA transcripts can be successfully applied to X. tropicalis without alteration.

Abstract: Additionally, X. laevis probes often work in X. tropicalis--alleviating the immediate need to clone the X. tropicalis orthologs before initiating developmental studies.

Abstract: Antibodies that react against X. laevis proteins can effectively detect the X. tropicalis protein by using established immunohistochemistry procedures.

Abstract: Antisense morpholino oligonucleotides (MOs) offer a new alternative to study loss of gene activity during development.

Abstract: We show that MOs function in X. tropicalis.

Abstract: Finally, X. tropicalis offers the possibility for forward genetics and genomic analysis.


Requirement of c-myb in T cell development and in mature T cell function.

Abstract: Previous reports have suggested that the protooncogene c-myb participates in T cell development in the thymus and mature T cell proliferation.

Abstract: We have generated two T cell-specific c-myb knockout mouse models, myb/LckCre and myb/CD4Cre.

Abstract: We have demonstrated that c-myb is required for the development of thymocytes at the DN3 stage, for survival and proliferation of double-positive thymocytes, for differentiation of single-positive CD4 and CD8 T cells, and for the proliferative responses of mature T cells.

Abstract: In addition, our data show that c-myb is directly involved in the formation of double-positive CD4+CD8+CD25+, CD4+CD25+, and CD8+CD25+ T cells, developmental processes that may imply a role for c-myb in autoimmune dysfunction.


Effect of losartan on ambulatory short-term blood pressure variability and cardiovascular remodeling in hypertensive patients on hemodialysis.

Abstract: OBJECTIVE Previous studies have shown increases in ambulatory short-term blood pressure (BP) variability to be related to cardiovascular disease.

Abstract: In this study, we examined whether an angiotensin II type 1 receptor blocker losartan would improve ambulatory short-term BP variability in hypertensive patients on hemodialysis.

Abstract: METHODS Forty hypertensive patients on hemodialysis therapy were randomly assigned to the losartan treatment group (n=20) or the control treatment group (n=20).

Abstract: At baseline and 6 and 12 months after the treatment, 24-h ambulatory BP monitoring was performed.

Abstract: Echocardiography and measurements of brachial-ankle pulse wave velocity (baPWV) and biochemical parameters were also performed before and after therapy.

Abstract: RESULTS After 6- and 12-months of treatment, nighttime short-term BP variability, assessed on the basis of the coefficient of variation of ambulatory BP, was significantly decreased in the losartan group, but remained unchanged in the control group.

Abstract: Compared with the control group, losartan significantly decreased left ventricular mass index (LVMI), baPWV, and the plasma levels of brain natriuretic peptide and advanced glycation end products (AGE).

Abstract: Furthermore, multiple regression analysis showed significant correlations between changes in LVMI and changes in nighttime short-term BP variability, as well as between changes in LVMI and changes in the plasma levels of AGE.

Abstract: CONCLUSION These results suggest that losartan is beneficial for the suppression of pathological cardiovascular remodeling though its inhibitory effect on ambulatory short-term BP variability during nighttime.


Interleukin-17 mRNA expression in blood and CSF mononuclear cells is augmented in multiple sclerosis.

Abstract: Myelin-directed autoimmunity is considered to play a key role in the pathogenesis of multiple sclerosis (MS).

Abstract: Increased production of both pro- and anti-inflammatory cytokines is a common finding in MS.

Abstract: Interleukin-17 (IL-17) is a recently described cytokine produced in humans almost exclusively by activated memory T cells, which can induce the production of proinflammatory cytokines and chemokines from parenchymal cells and macrophages.

Abstract: In situ hybridisation with synthetic oligonucleotide probes was adopted to detect and enumerate IL-17 mRNA expressing mononuclear cells (MNC) in blood and cerebrospinal fluid (CSF) from patients with MS and control individuals.

Abstract: Numbers of IL-17 mRNA expressing blood MNC were higher in patients with MS and acute aseptic meningoencephalitis (AM) compared to healthy individuals.

Abstract: Higher numbers of IL-17 mRNA expressing blood MNC were detected in MS patients examined during clinical exacerbation compared to remission.

Abstract: Patients with MS had higher numbers of IL-17 mRNA expressing MNC in CSF compared to blood.

Abstract: This increase in numbers of IL-17 mRNA expressing MNC in CSF was not observed in patients with AM.

Abstract: Our results thus demonstrate increased numbers of IL-17 mRNA expressing MNC in MS with higher numbers in CSF than blood, and with the highest numbers in blood during clinical exacerbations.


A European perspective on population studies of dementia.

Abstract: The change in the world's age demographics and the predicted rise in the incidence of age-related diseases, including dementia, is a source of major public health concern.

Abstract: Major research effort in both the United States and Europe has been targeted toward understanding the pathogenesis and epidemiology of dementia.

Abstract: This article presents a general overview of the history of dementia research in Europe and how it compares with that in the United States.

Abstract: The review highlights the common issues which both U.S. and European researchers have identified and attempted to tackle.

Abstract: To maximize information gained from studies across the world, better harmonization of methodology is needed, as informed from current research practice.


The cost of providing comprehensive HIV treatment in PEPFAR-supported programs.

Abstract: BACKGROUND PEPFAR, national governments, and other stakeholders are investing unprecedented resources to provide HIV treatment in developing countries.

Abstract: This study reports empirical data on costs and cost trends in a large sample of HIV treatment sites.

Abstract: DESIGN In 2006-2007, we conducted cost analyses at 43 PEPFAR-supported outpatient clinics providing free comprehensive HIV treatment in Botswana, Ethiopia, Nigeria, Uganda, and Vietnam.

Abstract: METHODS We collected data on HIV treatment costs over consecutive 6-month periods starting from scale-up of dedicated HIV treatment services at each site.

Abstract: The study included all patients receiving HIV treatment and care at study sites [62,512 antiretroviral therapy (ART) and 44,394 pre-ART patients].

Abstract: Outcomes were costs per patient and total program costs, subdivided by major cost categories.

Abstract: RESULTS Median annual economic costs were US$ 202 (2009 USD) for pre-ART patients and US$ 880 for ART patients.

Abstract: Excluding antiretrovirals, per patient ART costs were US$ 298.

Abstract: Care for newly initiated ART patients cost 15-20% more than for established patients.

Abstract: Per patient costs dropped rapidly as sites matured, with per patient ART costs dropping 46.8% between first and second 6-month periods after the beginning of scale-up, and an additional 29.5% the following year.

Abstract: PEPFAR provided 79.4% of funding for service delivery, and national governments provided 15.2%.

Abstract: CONCLUSION Treatment costs vary widely between sites, and high early costs drop rapidly as sites mature.

Abstract: Treatment costs vary between countries and respond to changes in antiretroviral regimen costs and the package of services.

Abstract: Whereas cost reductions may allow near-term program growth, programs need to weigh the trade-off between improving services for current patients and expanding coverage to new patients.


A sperm cytoskeletal protein that signals oocyte meiotic maturation and ovulation.

Abstract: Caenorhabditis elegans oocytes, like those of most animals, arrest during meiotic prophase.

Abstract: Sperm promote the resumption of meiosis (maturation) and contraction of smooth muscle-like gonadal sheath cells, which are required for ovulation.

Abstract: We show that the major sperm cytoskeletal protein (MSP) is a bipartite signal for oocyte maturation and sheath contraction.

Abstract: MSP also functions in sperm locomotion, playing a role analogous to actin.

Abstract: Thus, during evolution, MSP has acquired extracellular signaling and intracellular cytoskeletal functions for reproduction.

Abstract: Proteins with MSP-like domains are found in plants, fungi, and other animals, suggesting that related signaling functions may exist in other phyla.


Unmet need for mental health care among U.S. children: variation by ethnicity and insurance status.

Abstract: OBJECTIVE Policy discussions regarding the mental health needs of children and adolescents emphasize a lack of use of mental health services among youth, but few national estimates are available.

Abstract: The authors use three national data sets and examine ethnic disparities in unmet need (defined as having a need for mental health evaluation but not using any services in a 1-year period) to provide such estimates.

Abstract: METHOD The authors conducted secondary data analyses in three nationally representative household surveys fielded in 1996-1998: the National Health Interview Survey, the National Survey of American Families, and the Community Tracking Survey.

Abstract: They determined rates of mental health service use by children and adolescents 3-17 years of age and differences by ethnicity and insurance status.

Abstract: Among the children defined as in need of mental health services, defined by an estimator of mental health problems (selected items from the Child Behavior Checklist), they examined the association of unmet need with ethnicity and insurance status.

Abstract: RESULTS In a 12-month period, 2%-3% of children 3-5 years old and 6%-9% of children and adolescents 6-17 years old used mental health services.

Abstract: Of children and adolescents 6-17 years old who were defined as needing mental health services, nearly 80% did not receive mental health care.

Abstract: Controlling for other factors, the authors determined that the rate of unmet need was greater among Latino than white children and among uninsured than publicly insured children.

Abstract: CONCLUSIONS These findings reveal that most children who need a mental health evaluation do not receive services and that Latinos and the uninsured have especially high rates of unmet need relative to other children.

Abstract: Rates of use of mental health services are extremely low among preschool children.

Abstract: Research clarifying the reasons for high rates of unmet need in specific groups can help inform policy and clinical programs.


Conditional economic incentives for reducing HIV risk behaviors: integration of psychology and behavioral economics.

Abstract: OBJECTIVE This article reviews psychology and behavioral economic approaches to HIV prevention, and examines the integration and application of these approaches in conditional economic incentive (CEI) programs for reducing HIV risk behavior.

Abstract: METHODS We discuss the history of HIV prevention approaches, highlighting the important insights and limitations of psychological theories.

Abstract: We provide an overview of the theoretical tenets of behavioral economics that are relevant to HIV prevention, and utilize CEIs as an illustrative example of how traditional psychological theories and behavioral economics can be combined into new approaches for HIV prevention.

Abstract: RESULTS Behavioral economic interventions can complement psychological frameworks for reducing HIV risk by introducing unique theoretical understandings about the conditions under which risky decisions are amenable to intervention.

Abstract: Findings from illustrative CEI programs show mixed but generally promising effects of economic interventions on HIV and sexually transmitted infection (STI) prevalence, HIV testing, HIV medication adherence, and drug use.

Abstract: CONCLUSIONS CEI programs can complement psychological interventions for HIV prevention and behavioral risk reduction.

Abstract: To maximize program effectiveness, CEI programs must be designed according to contextual and population-specific factors that may determine intervention applicability and success.


ALDH1 is a marker of normal and malignant human mammary stem cells and a predictor of poor clinical outcome.

Abstract: Application of stem cell biology to breast cancer research has been limited by the lack of simple methods for identification and isolation of normal and malignant stem cells.

Abstract: Utilizing in vitro and in vivo experimental systems, we show that normal and cancer human mammary epithelial cells with increased aldehyde dehydrogenase activity (ALDH) have stem/progenitor properties.

Abstract: These cells contain the subpopulation of normal breast epithelium with the broadest lineage differentiation potential and greatest growth capacity in a xenotransplant model.

Abstract: In breast carcinomas, high ALDH activity identifies the tumorigenic cell fraction, capable of self-renewal and of generating tumors that recapitulate the heterogeneity of the parental tumor.

Abstract: In a series of 577 breast carcinomas, expression of ALDH1 detected by immunostaining correlated with poor prognosis.

Abstract: These findings offer an important new tool for the study of normal and malignant breast stem cells and facilitate the clinical application of stem cell concepts.


Interleukin-6 and interleukin-8 levels in serum and synovial fluid of patients with osteoarthritis.

Abstract: Concentrations of interleukin (IL)-6 and IL-8 in serum and synovial fluid obtained from patients with osteoarthritis (OA) of the knee were determined by the chemiluminescence-ELISA (CL-ELISA) method, the sensitivity of which is 100-1,000 times greater than that of the conventional ELISA method.

Abstract: The results were compared with those obtained from patients with rheumatoid arthritis (RA) and from healthy subjects.

Abstract: The mean IL-6 and IL-8 levels in synovial fluid indicated higher concentrations in RA than in OA.

Abstract: The IL-6 and IL-8 levels in serum were significantly higher in RA and OA relative to controls.

Abstract: Among OA patients in whom remarkable improvement was noted in hydrarthrosis, the synovial fluid IL-6 and IL-8 levels at the initial examination were relatively higher, and were markedly decreased after treatment with sodium hyaluronate (NaHA).

Abstract: Among those in whom no improvement was noted in hydrarthrosis, the synovial fluid IL-6 and IL-8 levels at the time of initial examination were relatively lower, and hydrarthrosis was not significantly improved even after treatment with NaHA.

Abstract: In addition, there was a tendency for the synovial fluid IL-6 and IL-8 levels to decrease as HA levels increased.

Abstract: Evaluation of X-ray findings revealed that the IL-6 levels in synovial fluid at the initial examination in low-grade cases tended to be significantly higher than in high-grade cases.

Abstract: In low-grade cases, as determined by X-ray findings, there was a significant decrease in IL-6 levels in synovial fluid after treatment with NaHA.


Inhibition of SRC expression and activity inhibits tumor progression and metastasis of human pancreatic adenocarcinoma cells in an orthotopic nude mouse model.

Abstract: The nonreceptor protein tyrosine kinase Src is overexpressed in 70% of pancreatic adenocarcinomas.

Abstract: Here, we describe the effect of molecular and pharmacological down-regulation of Src on incidence, growth, and metastasis of pancreatic tumor cells in an orthotopic model.

Abstract: Src expression in L3.6pl human pancreatic tumor cells was reduced by stable expression of a plasmid encoding small interfering RNA (siRNA) to c-src.

Abstract: In stable siRNA clones, Src expression was reduced >80%, with no change in expression of the related kinases c-Yes and c-Lyn, and proliferation rates were similar in all clones.

Abstract: Phosphorylation of Akt and p44/42 Erk mitogen-activated protein kinase and production of VEGF and IL-8 in culture supernatants were also reduced (P < 0.005).

Abstract: On orthotopic implantation of varying cell numbers into nude mice, tumor incidence was unchanged; however, in the siRNA clones, large tumors failed to develop, and incidence of metastasis was significantly reduced, suggesting that c-Src activity is critical to tumor progression.

Abstract: To examine this possibility further, animals bearing established wild-type tumors were treated with the Src/Abl-selective inhibitor BMS-354825 (dasatinib).

Abstract: Tumor size was decreased, and incidence of metastases was significantly reduced in treated mice compared with controls.

Abstract: These results demonstrate that Src activation contributes to pancreatic tumor progression in this model, offering Src as a candidate for targeted therapy.


Eicosapentaenoic acid is converted via ω-3 epoxygenation to the anti-inflammatory metabolite 12-hydroxy-17,18-epoxyeicosatetraenoic acid.

Abstract: Eicosapentaenoic acid (EPA) has beneficial effects in many inflammatory disorders.

Abstract: In this study, dietary EPA was converted to 17,18-epoxyeicosatetraenoic acid (17,18-EpETE) by ω-3 epoxygenation in the mouse peritoneal cavity.

Abstract: Mediator lipidomics revealed a series of novel oxygenated metabolites of 17,18-EpETE, and one of the major metabolites, 12-hydroxy-17,18-epoxyeicosatetraenoic acid (12-OH-17,18-EpETE), displayed a potent anti-inflammatory action by limiting neutrophil infiltration in murine zymosan-induced peritonitis.

Abstract: 12-OH-17,18-EpETE inhibited leukotriene B4-induced neutrophil chemotaxis and polarization in vitro in a low nanomolar range (EC50 0.6 nM).

Abstract: The complete structures of two natural isomers were assigned as 12S-OH-17R,18S-EpETE and 12S-OH-17S,18R-EpETE, using chemically synthesized stereoisomers.

Abstract: These natural isomers displayed potent anti-inflammatory action, whereas the unnatural stereoisomers were essentially devoid of activity.

Abstract: These results demonstrate that 17,18-EpETE derived from dietary EPA is converted to a potent bioactive metabolite 12-OH-17,18-EpETE, which may generate an endogenous anti-inflammatory metabolic pathway.


Scrapie in mice. Agent-strain differences in the distribution and intensity of grey matter vacuolation.

Abstract: Five strains of scrapie agent were used as intracerebral inocula for 2 inbred mouse strains, C57BL and VM, and their F1 cross.

Abstract: The degree of vacuolation in specified regions of the brain, and the relative distribution of this damage in 9 regions represented as a “lesion profile”, was different for each agent.

Abstract: Any of the 5 scrapie agents could be distinguished from the others with a very high degree of reliability solely on the basis of these histological parameters, using either strain of mouse.

Abstract: The lesion profile was unaffected by the dose of the agent, using doses of ME7 agent ranging over 6 orders of magnitude in C57BL mice.

Abstract: The genotype of mouse had a marked effect on the overall degree of vacuolation and on the shape of the lesion profile: these effects were more profound with some agents than others.

Abstract: In certain areas of the brain, depending upon the strain of agent used, the (C57BL × VM)F1 cross was found to have either significantly more or significantly less vacuolation than either parental genotype.

Abstract: The genetic control of the lesion profile was found to be too complex for more detailed analysis in these data.


Cyclin A2 is an RNA binding protein that controls Mre11 mRNA translation

Abstract: Cyclin A2 activates the cyclin-dependent kinases Cdk1 and Cdk2 and is expressed at elevated levels from S phase until early mitosis.

Abstract: We found that mutant mice that cannot elevate cyclin A2 are chromosomally unstable and tumor-prone.

Abstract: Underlying the chromosomal instability is a failure to up-regulate the meiotic recombination 11 (Mre11) nuclease in S phase, which leads to impaired resolution of stalled replication forks, insufficient repair of double-stranded DNA breaks, and improper segregation of sister chromosomes.

Abstract: Unexpectedly, cyclin A2 controlled Mre11 abundance through a C-terminal RNA binding domain that selectively and directly binds Mre11 transcripts to mediate polysome loading and translation.

Abstract: These data reveal cyclin A2 as a mechanistically diverse regulator of DNA replication combining multifaceted kinase-dependent functions with a kinase-independent, RNA binding–dependent role that ensures adequate repair of common replication errors.


Cluster sampling to assess immunization coverage: a review of experience with a simplified sampling method.

Abstract: The Expanded Program on Immunization (EPI) is using a simplified cluster sampling method, based on the random selection of 210 children in 30 clusters of 7 children each, to estimate immunization coverage levels.

Abstract: This article analyzes the results of this method in actual and computer simulated surveys.

Abstract: Results from 60 actual surveys conducted in 25 countries were available for analysis, for a total of 446 sample estimations of immunization coverage.

Abstract: 83% of the sample results had 95% confidence limits within + or - 10%, and none of the surveys had 95% confidence limits exceeding + or - 13%.

Abstract: In addition, 12 hypothetical population strata with immunization coverage rates ranging from 10%-99% were established for the purposes of computer simulation, and 10 hypothetical communities were established by allocating to them various proportions of each of the strata.

Abstract: These simulated surveys also supported the validity of the EPI method: over 95% of the results were less than + or - 10% from the actual population mean.

Abstract: The precision of this method, as estimated from the results of both actual and simulated surveys, is considered satisfactory for the requirements of the EPI.

Abstract: Among the actual surveys, the proportion of results whose confidence limits exceeded + or - 10% was greatest (50%) when immunization coverage in the sample was 45%-54%.


Gender differences in the utilization of health care services.

Abstract: BACKGROUND Studies have shown that women use more health care services than men.

Abstract: We used important independent variables, such as patient sociodemographics and health status, to investigate gender differences in the use and costs of these services.

Abstract: METHODS New adult patients (N = 509) were randomly assigned to primary care physicians at a university medical center.

Abstract: Their use of health care services and associated charges were monitored for 1 year of care.

Abstract: Self-reported health status was measured using the Medical Outcomes Study Short Form-36 (SF-36).

Abstract: We controlled for health status, sociodemographic information, and primary care physician specialty in the statistical analyses.

Abstract: RESULTS Women had significantly lower self-reported health status and lower mean education and income than men.

Abstract: Women had a significantly higher mean number of visits to their primary care clinic and diagnostic services than men.

Abstract: Mean charges for primary care, specialty care, emergency treatment, diagnostic services, and annual total charges were all significantly higher for women than men; however, there were no differences for mean hospitalizations or hospital charges.

Abstract: After controlling for health status, sociodemographics, and clinic assignment, women still had higher medical charges for all categories of charges except hospitalizations.

Abstract: CONCLUSIONS Women have higher medical care service utilization and higher associated charges than men.

Abstract: Although the appropriateness of these differences was not determined, these findings have implications for health care.


Recombinant human tumor necrosis factor administered as a 24-hour intravenous infusion. A phase I and pharmacologic study.

Abstract: Recombinant human tumor necrosis factor (rH-TNF) is a cytokine with direct antitumor properties.

Abstract: In a phase I trial we continuously infused rH-TNF for 24 hours.

Abstract: We gave a total of 115 courses of therapy to 50 patients.

Abstract: Doses ranged from 4.5 to 645 micrograms of rH-TNF/m2.

Abstract: Systemic toxicity, including fever, chills, fatigue, and hypotension, increased with the dose of rH-TNF administered.

Abstract: Doses greater than 454 micrograms/m2 frequently caused severe lethargy and fatigue, which precluded hospital discharge of the patient at the completion of therapy.

Abstract: The dose-limiting toxicity was hypotension, and five patients treated at the two highest dose levels required dopamine treatment.

Abstract: Other organ-specific toxicity was modest and spontaneously resolved after 48 hours.

Abstract: The 24-hour infusions of rH-TNF were associated with significant decreases in serum cholesterol and high-density lipoprotein levels.

Abstract: Pharmacokinetic studies using an enzyme-linked immunosorbent assay demonstrated peak plasma rH-TNF levels of 90-900 pg/mL. Despite continuous infusion of rH-TNF, no steady-state level was achieved.

Abstract: The recommended phase II dose for rH-TNF as a 24-hour continuous infusion is 545 micrograms/m2.


Detection and comparison of epidermal growth factor receptor mutations in cells and fluid of malignant pleural effusion in non-small cell lung cancer.

Abstract: Cells or cell-free fluid of malignant pleural effusion could be important clinical specimen for epidermal growth factor receptor (EGFR) mutation screening in advanced non-small cell lung cancer (NSCLC) patients.

Abstract: However, their usefulness in mutation detection has not been well compared.

Abstract: In this study we recruited 26 East Asian NSCLC patients with malignant pleural effusion, determined the mutation status of EGFR in both cells and matched cell-free fluid with the use of sequencing and mutant-enriched PCR.

Abstract: After comparing the mutation spectrums, we found both the cells and cell-free pleural fluid may be feasible clinical specimen for EGFR mutation detection in unresectable NSCLC given sensitive genotyping assays employed.

Abstract: Direct sequencing could miss a significant portion of mutations in these heterogeneous specimens.

Abstract: More sensitive methods, such as mutant-enriched PCR and gene scan, could provide more reliable mutational information.


Materials and Methods Figs. S1 to S15 References Supporting Online Materials

Abstract: Endosomal Toll-like receptors (TLRs) 7 and 9 recognize viral pathogens and induce signals leading to the activation of nuclear factor κB (NF-κB)-dependent proinflammatory cytokines and interferon regulatory factor 7 (IRF7)-dependent type I interferons (IFNs).

Abstract: Recognition of viral nucleic acids by TLR9 requires its cleavage in the endolysosomal compartment.

Abstract: Here, we show that TLR9 signals leading to the activation of type I IFN, but not proinflammatory cytokine genes, require TLR9 trafficking from endosomes to a specialized lysosome-related organelle.

Abstract: Furthermore, we identify adapter protein-3 as the protein complex responsible for the trafficking of TLR9 to this subcellular compartment.

Abstract: Our results reveal an intracellular mechanism for bifurcation of TLR9 signals by selective receptor trafficking within the endosomal system.


Sedimentation velocity method in the analytical ultracentrifuge for the study of protein-protein interactions.

Abstract: Sedimentation analysis in the analytical ultracentrifuge can be employed to detect macromolecular interactions.

Abstract: Whenever two molecules interact the mass of the resulting complex is increased and this is reflected in the sedimentation behavior.

Abstract: In this chapter we discuss how this phenomenon can be utilized to determine quantitative parameters of an interaction.

Abstract: An example, interaction of single-stranded DNA binding protein with a subunit of DNA polymerase III holoenzyme is given together with a thorough treatment of the relating theory and a description of evaluation algorithms.


Structural trends in the aging femoral neck and proximal shaft: analysis of the Third National Health and Nutrition Examination Survey dual-energy X-ray absorptiometry data.

Abstract: Hip scans of U.S. adults aged 20-99 years acquired in the Third National Health and Nutrition Examination Survey (NHANES III) using dual-energy X-ray absorptiometry (DXA) were analyzed with a structural analysis program.

Abstract: The program analyzes narrow (3 mm wide) regions at specific locations across the proximal femur to measure bone mineral density (BMD) as well as cross-sectional areas (CSAs), cross-sectional moments of inertia (CSMI), section moduli, subperiosteal widths, and estimated mean cortical thickness.

Abstract: Measurements are reported here on a non-Hispanic white subgroup of 2,719 men and 2,904 women for a cortical region across the proximal shaft 2 cm distal to the lesser trochanter and a mixed cortical/trabecular region across the narrowest point of the femoral neck.

Abstract: Apparent age trends in BMD and section modulus were studied for both regions by sex after correction for body weight.

Abstract: The BMD decline with age in the narrow neck was similar to that seen in the Hologic neck region; BMD in the shaft also declined, although at a slower rate.

Abstract: A different pattern was seen for section modulus; furthermore, this pattern depended on sex.

Abstract: Specifically, the section modulus at both the narrow neck and the shaft regions remains nearly constant until the fifth decade in females and then declined at a slower rate than BMD.

Abstract: In males, the narrow neck section modulus declined modestly until the fifth decade and then remained nearly constant whereas the shaft section modulus was static until the fifth decade and then increased steadily.

Abstract: The apparent mechanism for the discord between BMD and section modulus is a linear expansion in subperiosteal diameter in both sexes and in both regions, which tends to mechanically offset net loss of medullary bone mass.

Abstract: These results suggest that aging loss of bone mass in the hip does not necessarily mean reduced mechanical strength.

Abstract: Femoral neck section moduli in the elderly are on the average within 14% of young values in females and within 6% in males.


Turning blood into brain: cells bearing neuronal antigens generated in vivo from bone marrow.

Abstract: Bone marrow stem cells give rise to a variety of hematopoietic lineages and repopulate the blood throughout adult life.

Abstract: We show that, in a strain of mice incapable of developing cells of the myeloid and lymphoid lineages, transplanted adult bone marrow cells migrated into the brain and differentiated into cells that expressed neuron-specific antigens.

Abstract: These findings raise the possibility that bone marrow-derived cells may provide an alternative source of neurons in patients with neurodegenerative diseases or central nervous system injury.


A negative staining method for high resolution electron microscopy of viruses.

Abstract: Abstract A simple technique has been developed for the study of the external form and structure of virus particles.

Abstract: High contrast with good preservation is obtained by mixing virus preparations with 1% phosphotungstic acid adjusted to pH 7.5 and spraying directly onto electron microscope supporting films made from evaporated carbon.

Abstract: The application of the technique to tobacco mosaic virus and turnip yellow mosaic virus is described.

Abstract: Structural details suggested by X-ray diffraction methods have been resolved.


Nef induces multiple genes involved in cholesterol synthesis and uptake in human immunodeficiency virus type 1-infected T cells.

Abstract: Several recent reports indicate that cholesterol might play an important role in human immunodeficiency virus type 1 (HIV-1) replication.

Abstract: We investigated the effects of HIV-1 infection on cholesterol biosynthesis and uptake using microarrays.

Abstract: HIV-1 increased gene expression of cholesterol genes in both transformed T-cell lines and primary CD4(+) T cells.

Abstract: Consistent with our microarray data, (14)C-labeled mevalonate and acetate incorporation was increased in HIV-1-infected cells.

Abstract: Our data also demonstrate that changes in cholesterol biosynthesis and uptake are only observed in the presence of functional Nef, suggesting that increased cholesterol synthesis may contribute to Nef-mediated enhancement of virion infectivity and viral replication.


Long noncoding RNA as modular scaffold of histone modification complexes

Abstract: Long intergenic noncoding RNAs (lincRNAs) regulate chromatin states and epigenetic inheritance.

Abstract: Here, we show that the lincRNA HOTAIR serves as a scaffold for at least two distinct histone modification complexes.

Abstract: A 5' domain of HOTAIR binds polycomb repressive complex 2 (PRC2), whereas a 3' domain of HOTAIR binds the LSD1/CoREST/REST complex.

Abstract: The ability to tether two distinct complexes enables RNA-mediated assembly of PRC2 and LSD1 and coordinates targeting of PRC2 and LSD1 to chromatin for coupled histone H3 lysine 27 methylation and lysine 4 demethylation.

Abstract: Our results suggest that lincRNAs may serve as scaffolds by providing binding surfaces to assemble select histone modification enzymes, thereby specifying the pattern of histone modifications on target genes.


Therapeutic Clearance of Amyloid by Antibodies to Serum Amyloid P Component.

Abstract: BACKGROUND The amyloid fibril deposits that cause systemic amyloidosis always contain the nonfibrillar normal plasma protein, serum amyloid P component (SAP).

Abstract: The drug (R)-1-[6-[(R)-2-carboxy-pyrrolidin-1-yl]-6-oxo-hexanoyl]pyrrolidine-2-carboxylic acid (CPHPC) efficiently depletes SAP from the plasma but leaves some SAP in amyloid deposits that can be specifically targeted by therapeutic IgG anti-SAP antibodies.

Abstract: In murine amyloid A type amyloidosis, the binding of these antibodies to the residual SAP in amyloid deposits activates complement and triggers the rapid clearance of amyloid by macrophage-derived multinucleated giant cells.

Abstract: METHODS We conducted an open-label, single-dose-escalation, phase 1 trial involving 15 patients with systemic amyloidosis.

Abstract: After first using CPHPC to deplete circulating SAP, we infused a fully humanized monoclonal IgG1 anti-SAP antibody.

Abstract: Patients with clinical evidence of cardiac involvement were not included for safety reasons.

Abstract: Organ function, inflammatory markers, and amyloid load were monitored.

Abstract: RESULTS There were no serious adverse events.

Abstract: Infusion reactions occurred in some of the initial recipients of larger doses of antibody; reactions were reduced by slowing the infusion rate for later patients.

Abstract: At 6 weeks, patients who had received a sufficient dose of antibody in relation to their amyloid load had decreased liver stiffness, as measured with the use of transient elastography.

Abstract: These patients also had improvements in liver function in association with a substantial reduction in hepatic amyloid load, as shown by means of SAP scintigraphy and measurement of extracellular volume by magnetic resonance imaging.

Abstract: A reduction in kidney amyloid load and shrinkage of an amyloid-laden lymph node were also observed.

Abstract: CONCLUSIONS Treatment with CPHPC followed by an anti-SAP antibody safely triggered clearance of amyloid deposits from the liver and some other tissues.

Abstract: (Funded by GlaxoSmithKline; ClinicalTrials.gov number, NCT01777243.).


LPA Gene, Ethnicity, and Cardiovascular Events

Abstract: Background: The relationship of LPA single nucleotide polymorphisms (SNPs), apolipoprotein(a) isoforms, and lipoprotein(a) [Lp(a)] levels with major adverse cardiovascular events (MACE) in different ethnic groups is not well known.

Abstract: Methods: LPA SNPs, apolipoprotein(a) isoforms, Lp(a), and oxidized phospholipids on apolipoprotein B-100 (OxPL-apoB) levels were measured in 1792 black, 1030 white, and 597 Hispanic subjects enrolled in the Dallas Heart Study.

Abstract: Their interdependent relationships and prospective association with MACE after median 9.5-year follow-up were determined.

Abstract: Results: LPA SNP rs3798220 was most prevalent in Hispanics (42.38%), rs10455872 in whites (14.27%), and rs9457951 in blacks (32.92%).

Abstract: The correlation of each of these SNPs with the major apolipoprotein(a) isoform size was highly variable and in different directions among ethnic groups.

Abstract: In the entire cohort, Cox regression analysis with multivariable adjustment revealed that quartiles 4 of Lp(a) and OxPL-apoB were associated with hazard ratios (95% confidence interval) for time to MACE of 2.35 (1.50–3.69, P<0.001) and 1.89 (1.26–2.84, P=0.003), respectively, versus quartile 1.

Abstract: Addition of the major apolipoprotein(a) isoform and the 3 LPA SNPs to these models attenuated the risk, but significance was maintained for both Lp(a) and OxPL-apoB. Evaluating time to MACE in specific ethnic groups, Lp(a) was a positive predictor and the size of the major apolipoprotein(a) isoform was an inverse predictor in blacks, the size of the major apolipoprotein(a) isoform was an inverse predictor in whites, and OxPL-apoB was a positive predictor in Hispanics.

Abstract: Conclusions: The prevalence and association of LPA SNPs with size of apolipoprotein(a) isoforms, Lp(a), and OxPL-apoB levels are highly variable and ethnicity-specific.

Abstract: The relationship to MACE is best explained by elevated plasma Lp(a) or OxPL-apoB levels, despite significant ethnic differences in LPA genetic markers.


Protein kinase CK2 modulates developmental functions of the abscisic acid responsive protein Rab17 from maize.

Abstract: The maize abscisic acid responsive protein Rab17 is a highly phosphorylated late embryogenesis abundant protein involved in plant responses to stress.

Abstract: In this study, we provide evidence of the importance of Rab17 phosphorylation by protein kinase CK2 in growth-related processes under stress conditions.

Abstract: We show the specific interaction of Rab17 with the CK2 regulatory subunits CK2 beta-1 and CK2 beta-3, and that these interactions do not depend on the phosphorylation state of Rab17.

Abstract: Live-cell fluorescence imaging of both CK2 and Rab17 indicates that the intracellular dynamics of Rab17 are regulated by CK2 phosphorylation.

Abstract: We found both CK2 beta subunits and Rab17 distributed over the cytoplasm and nucleus.

Abstract: By contrast, catalytic CK2 alpha subunits and a Rab17 mutant protein (mRab17) that is not a substrate for CK2 phosphorylation remain accumulated in the nucleoli.

Abstract: A dual-color image shows that the CK2 holoenzyme accumulates mainly in the nucleus.

Abstract: The importance of Rab17 phosphorylation in vivo was assessed in transgenic plants.

Abstract: The overexpression of Rab17, but not mRab17, arrests the process of seed germination under osmotic stress conditions.

Abstract: Thus, the role of Rab17 in growth processes is mediated through its phosphorylation by protein kinase CK2.


Reduced plasma concentrations of nitrogen oxide in individuals with essential hypertension.

Abstract: Patients with essential hypertension exhibit blunted endothelium-dependent vasodilator responses, which may be largely attributable to reduced bioactivity of nitric oxide (NO).

Abstract: Therefore, we measured the end product of NO, nitrate plus nitrite (nitrogen oxide), and examined the relationship between the degree of hypertension and plasma nitrate plus nitrite levels in patients with essential hypertension.

Abstract: The combined plasma concentration of nitrate plus nitrite, end products of NO metabolism, was reduced in individuals with essential hypertension relative to that in control subjects (15.7+/-1.1 versus 22.8+/-1.4 mmol x L(-1), P<.001); individuals with borderline hypertension showed values that were intermediate between those of the other two groups (18.2+/-1.2 mmol x L(-1), P<.001).

Abstract: The plasma nitrogen oxide concentration showed significant inverse correlations with both systolic and diastolic blood pressures.

Abstract: The basal concentration of nitrogen oxide in the plasma was reduced, at least in the peripheral circulation, in individuals with essential hypertension.


Isolation of superoxide dismutase mutants in Escherichia coli: is superoxide dismutase necessary for aerobic life?

Abstract: Mu transposons carrying the chloramphenicol resistance marker have been inserted into the cloned Escherichia coli genes sodA and sodB coding for manganese superoxide dismutase (MnSOD) and iron superoxide dismutase (FeSOD) respectively, creating mutations and gene fusions.

Abstract: The mutated sodA or sodB genes were introduced into the bacterial chromosome by allelic exchange.

Abstract: The resulting mutants were shown to lack the corresponding SOD by activity measurements and immunoblot analysis.

Abstract: Aerobically, in rich medium, the absence of FeSOD or MnSOD had no major effect on growth or sensitivity to the superoxide generator, paraquat.

Abstract: In minimal medium aerobic growth was not affected, but the sensitivity to paraquat was increased, especially in the sodA mutant.

Abstract: A sodA sodB double mutant completely devoid of SOD was also obtained.

Abstract: It was able to grow aerobically in rich medium, its catalase level was unaffected and it was highly sensitive to paraquat and hydrogen peroxide; the double mutant was unable to grow aerobically on minimal glucose medium.

Abstract: Growth could be restored by removing oxygen, by providing an SOD-overproducing plasmid or by supplementing the medium with the 20 amino acids.

Abstract: It is concluded that the total absence of SOD in E. coli creates a conditional sensitivity to oxygen.


Late presentation of HIV-infected individuals.

Abstract: Late presentation remains a major concern despite the dramatically improved prognosis realized by ART.

Abstract: We define a first presentation for HIV care during the course of HIV infection as 'late' if an AIDS-defining opportunistic disease is apparent, or if CD4+ T-cells are <200/microl.

Abstract: In the Western world, approximately 10 and 30% of HIV-infected individuals still present with CD4+ T-cells <50 and <200/microl, respectively; estimates are substantially higher for developing countries.

Abstract: Diagnosis and treatment of opportunistic diseases and intense supportive in-hospital care take precedence over ART.

Abstract: Benefits of starting ART without delay, that is, when opportunistic diseases are still active, include faster resolution of opportunistic diseases and a decreased risk of recurrence.

Abstract: The downside of starting ART without delay could include toxicity, drug interactions and immune reconstitution inflammatory syndrome (IRIS).

Abstract: Among asymptomatic or oligosymptomatic individuals presenting late, where ART and primary prophylaxis are initiated, approximately 10-20% will become symptomatic from drug toxicity or undiagnosed opportunistic complications, including IRIS, which require appropriate therapies.

Abstract: In this review we describe late presentation to HIV care, the scale of the problem, the evaluation of a late-presenting patient and challenges associated with initiation of potent antiretroviral therapy (ART) in the setting of acute opportunistic infections and other comorbidities.


Rapid clearance of human papillomavirus and implications for clinical focus on persistent infections.

Abstract: Health professionals and the public need to understand the natural history of human papillomavirus (HPV) infections of the cervix to best use the information provided by new molecular screening tests.

Abstract: We investigated outcomes of 800 carcinogenic HPV infections detected in 599 women at enrollment into a population-based cohort (Guanacaste, Costa Rica).

Abstract: For individual infections, we calculated cumulative proportions of three outcomes (viral clearance, persistence without cervical intraepithelial neoplasia grade 2 or worse [CIN2+], or persistence with new diagnosis of CIN2+) at successive 6-month time points for the first 30 months of follow-up.

Abstract: Cervical specimens were tested for carcinogenic HPV genotypes using an L1 degenerate-primer polymerase chain reaction method.

Abstract: Infections typically cleared rapidly, with 67% (95% confidence interval [CI] = 63% to 70%) clearing by 12 months.

Abstract: However, among infections that persisted at least 12 months, the risk of CIN2+ diagnosis by 30 months was 21% (95% CI = 15% to 28%).

Abstract: The risk of CIN2+ diagnosis was highest among women younger than 30 years with HPV-16 infections that persisted for at least 12 months (53%; 95% CI = 29% to 76%).

Abstract: These findings suggest that the medical community should emphasize persistence of cervical HPV infection, not single-time detection of HPV, in management strategies and health messages.


The role of alcohol in the Russian mortality crisis.

Abstract: AIMS Alcohol is believed to be an important factor behind the sharp rise in mortality during the period 1990-94 in Russia.

Abstract: However, the rise in the standard alcohol consumption proxy does not seem to be sufficient to explain all the increase in mortality.

Abstract: This study adopts a novel approach to exploring the role of the alcohol factor in the increased mortality by investigating whether the mismatch between trends in mortality and recorded alcohol consumption is due to an underestimation of the consumption increase.

Abstract: DESIGN AND MEASUREMENTS First, the alcohol effect on the male accident rate was estimated using data for the period 1959-89.

Abstract: Next, the estimated alcohol effect and the observed accident mortality rate for the period 1990-98 were used to backcast alcohol consumption during that period.

Abstract: Thirdly, the backcasted alcohol series was used to predict trajectories in alcohol poisoning mortality, the homicide rate and all-cause mortality during the period 1990-98.

Abstract: FINDINGS

Abstract: There was a markedly stronger increase in the backcasted consumption proxy than in the standard alcohol consumption proxy during the period 1990-98.

Abstract: There was a substantial gap between the observed mortality rates and the rates predicted from the standard alcohol consumption proxy, whereas the predictions from the backcasted alcohol proxy were much closer to the target.

Abstract: CONCLUSIONS Much of the rise in Russian mortality in 1990-94 appears to have been due to the increase in population drinking, but this increase is grossly underestimated by the commonly used consumption proxy combining alcohol sales, estimation of illicit alcohol production and proportion of alcohol-positive violent deaths.


The lateral hypothalamus: a primary site mediating excitatory amino acid-elicited eating.

Abstract: Lateral hypothalamic (LH) injections of the excitatory neurotransmitter glutamate, or its excitatory amino acid (EAA) agonists, kainic acid (KA), D,L-alpha-amino-3-hydroxy-5-methyl-isoxazole propionic acid (AMPA), or N-methyl-D-aspartic acid (NMDA), can rapidly elicit an intense feeding response in satiated rats.

Abstract: To determine whether the LH is the actual locus of this effect, we compared these compounds' ability to stimulate feeding when injected into the LH, versus when injected into sites bracketing this region.

Abstract: Food intake in groups of adult male rats was measured 1 h after injection of glutamate (30-900 nmol), KA (0.1-1.0 nmol), AMPA (0.33-3.3 nmol), NMDA (0.33-33.3 nmol) or vehicle, through chronically implanted guide cannulas, into one of seven brain sites.

Abstract: These sites were: the LH, the anterior and posterior tips of the LH, the thalamus immediately dorsal to the LH, the amygdala just lateral to the LH, or the paraventricular and perifornical areas medial to the LH.

Abstract: The results show that across doses and agonists the eating-stimulatory effects were largest with injections into the LH.

Abstract: In the LH, glutamate between 300 and 900 nmol elicited a dose-dependent eating response of up to 5 g within 1 h (P < 0.01).

Abstract: Each of the other agonists at doses of 3.3 nmol or less elicited eating responses of at least 10 g with injections into this site.

Abstract: Injections into the other brain sites produced either no eating, or occasionally smaller and less consistent eating responses.(ABSTRACT TRUNCATED AT 250 WORDS)


A Gateway® compatible vector for gene silencing in bloodstream form Trypanosoma brucei.

Abstract: RNA interference is the most rapid method for generation of conditional knockdown mutants in Trypanosoma brucei.

Abstract: The dual T7 promoter (pZJM) and the stem-loop vectors have been widely used to generate stable inducible RNAi cell lines with the latter providing tighter regulatory control.

Abstract: However, the steps for cloning stem-loop constructs are cumbersome requiring either multiple cloning steps or multi-fragment ligation reactions.

Abstract: We report the development of a vector (pTrypRNAiGate) derived from pLEW100 that utilizes the Gateway® recombination system to facilitate easy production of hairpin RNA constructs.

Abstract: This approach allows the final stem-loop RNAi construct to be generated from a single cloning step of the PCR-derived gene fragment followed by an in vitro recombination reaction.

Abstract: The new vector facilitates high-throughput applications for gene silencing and provides a tool for functional genomics in T. brucei.


Prolonged effect of calcium supplementation on risk of colorectal adenomas in a randomized trial.

Abstract: BACKGROUND Calcium supplementation has been shown to decrease the risk of recurrence of colorectal adenomas in randomized trials.

Abstract: However, the duration of this protective effect after cessation of active supplementation is not known.

Abstract: METHODS In the Calcium Polyp Prevention Study, 930 subjects with a previous colorectal adenoma were randomly assigned from November 1988 through April 1992 to receive placebo or 1200 mg of elemental calcium daily for 4 years.

Abstract: The Calcium Follow-up Study was an observational phase of the trial that tracked adenoma occurrence for an average of 7 years after the end of randomized treatment and gathered information regarding the use of medications, vitamins, and supplements during that time.

Abstract: We obtained follow-up information for 822 subjects, 597 of whom underwent at least one colonoscopy after the end of study treatment and are included in this analysis.

Abstract: Generalized linear models were used to compute relative risks (RRs) and 95% confidence intervals (CIs) for the effect of randomized calcium treatment on risk of adenoma recurrence during the first 5 years after study treatment ended and during the subsequent 5 years.

Abstract: Statistical tests were two-sided.

Abstract: RESULTS During the first 5 years after randomized treatment ended, subjects in the calcium group still had a substantially and statistically significantly lower risk of any adenoma than those in the placebo group (31.5% versus 43.2%; adjusted RR = 0.63, 95% CI = 0.46 to 0.87, P = .005) and a smaller and not statistically significant reduction in risk of advanced adenomas (adjusted RR = 0.85, 95% CI = 0.43 to 1.69, P = .65).

Abstract: However, the randomized treatment was not associated with the risk of any type of polyp during the next 5 years.

Abstract: The findings were broadly similar when the analysis was restricted to subjects who did not report use of any calcium supplements after the treatment phase of the trial ended.

Abstract: CONCLUSION The protective effect of calcium supplementation on risk of colorectal adenoma recurrence extends up to 5 years after cessation of active treatment, even in the absence of continued supplementation.


Influence of DNA on the activities and inhibition of neutrophil serine proteases in cystic fibrosis sputum.

Abstract: Uncontrolled proteolysis by neutrophil serine proteases (NSPs) in lung secretions is a hallmark of cystic fibrosis (CF).

Abstract: We have shown that the active neutrophil elastase, protease 3, and cathepsin G in CF sputum resist inhibition in part by exogenous protease inhibitors.

Abstract: This resistance may be due to their binding to neutrophil extracellular traps (NETs) secreted by the activated neutrophils in CF sputum and to genomic DNA released from senescent and dead neutrophils.

Abstract: Treating CF sputum with DNase dramatically increases its elastase activity, which can then be stoichiometrically inhibited by exogenous elastase inhibitors.

Abstract: However, DNase treatment does not increase the activities of protease 3 and cathepsin G, indicating their different distribution and/or binding in CF sputum.

Abstract: Purified blood neutrophils secrete NETs when stimulated by the opportunistic CF bacteria Pseudomonas aeruginosa and Staphylococcus aureus.

Abstract: The activities of the three proteases were unchanged in these conditions, but subsequent DNase treatment produced a dramatic increase in all three proteolytic activities.

Abstract: Neutrophils activated with a calcium ionophore did not secrete NETs but released huge amounts of active proteases whose activities were not modified by DNase.

Abstract: We conclude that NETs are reservoirs of active proteases that protect them from inhibition and maintain them in a rapidly mobilizable status.

Abstract: Combining the effects of protease inhibitors with that of DNA-degrading agents could counter the deleterious proteolytic effects of NSPs in CF lung secretions.


Clinical effects of Abeta immunization (AN1792) in patients with AD in an interrupted trial.

Abstract: BACKGROUND AN1792 (beta-amyloid [Abeta]1-42) immunization reduces Abeta plaque burden and preserves cognitive function in APP transgenic mice.

Abstract: The authors report the results of a phase IIa immunotherapy trial of AN1792(QS-21) in patients with mild to moderate Alzheimer disease (AD) that was interrupted because of meningoencephalitis in 6% of immunized patients.

Abstract: METHODS This randomized, multicenter, placebo-controlled, double-blind trial of IM AN1792 225 microg plus the adjuvant QS-21 50 microg (300 patients) and saline (72 patients) included patients aged 50 to 85 years with probable AD, Mini-Mental State Examination (MMSE) 15 to 26.

Abstract: Injections were planned for months 0, 1, 3, 6, 9, and 12.

Abstract: Safety and tolerability were evaluated, and pilot efficacy (AD Assessment Scale-Cognitive Subscale [ADAS-Cog], MRI, neuropsychological test battery [NTB], CSF tau, and Abeta42) was assessed in anti-AN1792 antibody responder patients (immunoglobulin G titer > or = 1:2,200).

Abstract: RESULTS Following reports of meningoencephalitis (overall 18/300 [6%]), immunization was stopped after one (2 patients), two (274 patients), or three (24 patients) injections.

Abstract: Of the 300 AN1792(QS-21)-treated patients, 59 (19.7%) developed the predetermined antibody response.

Abstract: Double-blind assessments were maintained for 12 months.

Abstract: No significant differences were found between antibody responder and placebo groups for ADAS-Cog, Disability Assessment for Dementia, Clinical Dementia Rating, MMSE, or Clinical Global Impression of Change, but analyses of the z-score composite across the NTB revealed differences favoring antibody responders (0.03 +/- 0.37 vs -0.20 +/- 0.45; p = 0.020).

Abstract: In the small subset of subjects who had CSF examinations, CSF tau was decreased in antibody responders (n = 11) vs placebo subjects (n = 10; p < 0.001).

Abstract: CONCLUSION Although interrupted, this trial provides an indication that Abeta immunotherapy may be useful in Alzheimer disease.


Quantitative characterization of metastatic disease in the spine. Part I. Semiautomated segmentation using atlas-based deformable registration and the level set method.

Abstract: Quantitative assessment of metastatic disease in bone is often considered immeasurable and, as such, patients with skeletal metastases are often excluded from clinical trials.

Abstract: In order to effectively quantify the impact of metastatic tumor involvement in the spine, accurate segmentation of the vertebra is required.

Abstract: Manual segmentation can be accurate but involves extensive and time-consuming user interaction.

Abstract: Potential solutions to automating segmentation of metastatically involved vertebrae are demons deformable image registration and level set methods.

Abstract: The purpose of this study was to develop a semiautomated method to accurately segment tumor-bearing vertebrae using the aforementioned techniques.

Abstract: By maintaining morphology of an atlas, the demons-level set composite algorithm was able to accurately differentiate between trans-cortical tumors and surrounding soft tissue of identical intensity.

Abstract: The algorithm successfully segmented both the vertebral body and trabecular centrum of tumor-involved and healthy vertebrae.

Abstract: This work validates our approach as equivalent in accuracy to an experienced user.


Activation of lysosomal function during dendritic cell maturation.

Abstract: In response to a variety of stimuli, dendritic cells (DCs) transform from immature cells specialized for antigen capture into mature cells specialized for T cell stimulation.

Abstract: During maturation, the DCs acquire an enhanced capacity to form and accumulate peptide-MHC (major histocompatibility complex) class II complexes.

Abstract: Here we show that a key mechanism responsible for this alteration was the generalized activation of lysosomal function.

Abstract: In immature DCs, internalized antigens were slowly degraded and inefficiently used for peptide loading.

Abstract: Maturation induced activation of the vacuolar proton pump that enhanced lysosomal acidification and antigen proteolysis, facilitating efficient formation of peptide-MHC class II complexes.

Abstract: Lysosomal function in DCs thus appears to be specialized for the developmentally regulated processing of internalized antigens.


Comparison of agar dilution, microdilution, and disk elution methods for measuring the synergy of cefotaxime and its metabolite against anaerobes.

Abstract: The activities of cefotaxime (CTX) and desacetyl cefotaxime (des-CTX) were tested both singly and in combination against 173 anaerobic clinical isolates.

Abstract: The MIC of CTX for 50% of 60 Bacteroides fragilis isolates was 22.4 micrograms/ml in broth, compared with 47.4 micrograms/ml in agar.

Abstract: This reduced efficacy in agar was seen with all species tested and is in apparent conflict with reported clinical efficacy of the drug.

Abstract: Synergy between CTX and des-CTX was observed with 70 to 100% of the isolates, including 60% of all Bacteroides spp.

Abstract: tested.

Abstract: The susceptibility results in a synergy system correlated well with those noted in a broth-disk elution method incorporating 32 micrograms of CTX and 8 micrograms of des-CTX per ml.

Abstract: The correlation was poorer when the broth-disk method contained 16 micrograms of CTX and 8 micrograms of des-CTX per ml.


Retinoblastoma regulatory pathway in lung cancer.

Abstract: Lung cancer is the leading cause of cancer related deaths accounting for more deaths than breast, colon and prostate cancers combined.

Abstract: The Rb-p16 regulatory pathway plays an essential role in tumor suppression in the lung epithelium.

Abstract: This is evidenced by the nearly universal alterations in Rb-p16 pathway components in lung cancer, and the increased incidence of pulmonary carcinomas in persons with germline Rb mutations.

Abstract: Interestingly, p16 loss and Rb mutations preferentially occur in phenotypically distinct lung cancer subtypes.

Abstract: Analysis of human tumors has identified progressive preneoplastic lesions that accumulate molecular alterations in an orderly sequence.

Abstract: Epigenetic p16 gene modifications represent an early event in lung cancer progression.

Abstract: This review summarizes the human studies that demonstrate a critical role for the Rb-p16 tumor suppressor pathway in lung carcinogenesis, and discusses how these findings in combination with genetically engineered mouse models have significantly contributed to our understanding of lung cancer pathogenesis.


Human papillomavirus and Papanicolaou tests to screen for cervical cancer.

Abstract: BACKGROUND Screening for cervical cancer based on testing for human papillomavirus (HPV) increases the sensitivity of detection of high-grade (grade 2 or 3) cervical intraepithelial neoplasia, but whether this gain represents overdiagnosis or protection against future high-grade cervical epithelial neoplasia or cervical cancer is unknown.

Abstract: METHODS In a population-based screening program in Sweden, 12,527 women 32 to 38 years of age were randomly assigned at a 1:1 ratio to have an HPV test plus a Papanicolaou (Pap) test (intervention group) or a Pap test alone (control group).

Abstract: Women with a positive HPV test and a normal Pap test result were offered a second HPV test at least 1 year later, and those who were found to be persistently infected with the same high-risk type of HPV were then offered colposcopy with cervical biopsy.

Abstract: A similar number of double-blinded Pap smears and colposcopies with biopsy were performed in randomly selected women in the control group.

Abstract: Comprehensive registry data were used to follow the women for a mean of 4.1 years.

Abstract: The relative rates of grade 2 or 3 cervical intraepithelial neoplasia or cancer detected at enrollment and at subsequent screening examinations were calculated.

Abstract: RESULTS At enrollment, the proportion of women in the intervention group who were found to have lesions of grade 2 or 3 cervical intraepithelial neoplasia or cancer was 51% greater (95% confidence interval [CI], 13 to 102) than the proportion of women in the control group who were found to have such lesions.

Abstract: At subsequent screening examinations, the proportion of women in the intervention group who were found to have grade 2 or 3 lesions or cancer was 42% less (95% CI, 4 to 64) and the proportion with grade 3 lesions or cancer was 47% less (95% CI, 2 to 71) than the proportions of control women who were found to have such lesions.

Abstract: Women with persistent HPV infection remained at high risk for grade 2 or 3 lesions or cancer after referral for colposcopy.

Abstract: CONCLUSIONS The addition of an HPV test to the Pap test to screen women in their mid-30s for cervical cancer reduces the incidence of grade 2 or 3 cervical intraepithelial neoplasia or cancer detected by subsequent screening examinations.

Abstract: (ClinicalTrials.gov number, NCT00479375 [ClinicalTrials.gov].).


Chronic Exercise Increases Both Inducible and Endothelial Nitric Oxide Synthase Gene Expression in Endothelial Cells of Rat Aorta

Abstract: Chronic exercise upregulates endothelial nitric oxide synthase (eNOS) gene expression.

Abstract: Whether the expression of inducible nitric oxide synthase (iNOS) is affected by exercise is unknown.

Abstract: We therefore investigated the effects of chronic exercise on iNOS and eNOS expression in isolated rat aortic endothelial and smooth muscle cells separately.

Abstract: Five-week-old male Wistar rats were randomly divided into control and exercise groups.

Abstract: After 10 weeks of running training, animals were sacrificed under ether anesthesia.

Abstract: The standard curve quantitative competitive reverse transcriptase-polymerase chain reaction method was used to quantify NOS mRNA expression in isolated endothelial/smooth muscle cells.

Abstract: To evaluate the functional role of iNOS, we examined phenylephrine-induced vascular responses with or without pretreatment with aminoguanidine.

Abstract: We found that (1) expression of iNOS and eNOS mRNA in endothelial cells was increased by chronic exercise and (2) chronic exercise blunted phenylephrine-induced vascular responses, probably by increasing NO release via iNOS.

Abstract: Our results show that chronic exercise increases both iNOS and eNOS gene expression in endothelium.

Abstract: These alterations may be partially responsible for the change in vascular response after exercise.


Frontal stroke syndromes.

Abstract: The frontal lobe is the largest lobe of the brain, and it is thus commonly involved in stroke.

Abstract: Moreover, almost one in five strokes is limited to the prerolandic areas.

Abstract: This high frequency of anatomical involvement is in sharp contrast with the apparent rarity of clinical frontal dysfunction in stroke.

Abstract: It is remarkable that frontal behavioral syndromes have been rather uncommonly reported in patients with stroke as compared to patients with other diseases, such as brain tumor.

Abstract: This fact is paradoxical, because an acute process (stroke) is expected to yield more clinical dysfunction than a more chronic disease (tumor).

Abstract: A volume effect may be the main factor leading to this phenomenon.

Abstract: Another interesting aspect of frontal strokes is the contribution of so-called 'silent' strokes, the recurrence of which may nevertheless lead to intellectual decline and compromise recovery from another stroke with more specific neurologic dysfunction.

Abstract: The contribution of stroke to understanding of frontal lobe dysfunction is important, because of the focal nature of this disease, and great opportunity for clinical-topographic classification correlations.

Abstract: One of the first modern attempts to develop a clinical-topographic classification of frontal lobe lesions came from the school of Luria, who tried to delineate three main types of frontal lobe syndromes (premotor syndrome, prefrontal syndrome, medial-frontal syndrome).

Abstract: Recent anatomic correlates using MRI make it possible to improve this classification.

Abstract: We suggest considering six main clinical-anatomic frontal stroke syndromes: (1) prefrontal; (2) premotor; (3) superior medial; (4) orbital-medial; (5) basal forebrain; (6) white matter.

Abstract: Finally, another fascinating topic relates to frontal lobe symptomatology due to stroke sparing the frontal cortex or white matter.

Abstract: This occurs mainly in three instances: lenticulo-capsular stroke, caudate stroke, and thalamic stroke.

Abstract: Studies using blood flow or metabolism measurements suggest that diaschisis (frontal lobe dysfunction from a remote lesion) may play a role.

Abstract: We believe that this is more likely to be related to dynamic interruption of complex circuitry than to static frontal lobe deactivation.


Interaction of cytosine arabinoside and lovastatin in human leukemia cells.

Abstract: Cytosine arabinoside (ara-C) is widely used for the treatment of leukemias and displays significant toxicities.

Abstract: Lovastatin, an HMG-CoA reductase inhibitor, is extensively used to treat hypercholesterolemia.

Abstract: To determine whether lovastatin could augment ara-C's activity we have examined their effects in the human erythroleukemia K562 cell line and the ara-C resistant ARAC8D cell line.

Abstract: A synergistic interaction between the two drugs was found.

Abstract: We have demonstrated that the interaction does not occur at the level of RAS but may involve lovastatin's effect of downregulating MAPK activity and preventing ara-C-induced MAPK activation.

Abstract: These studies represent the first description of a potentially beneficial interaction between lovastatin and ara-C that could be applied to the treatment of human leukemia.


The crystal structure of TAL effector PthXo1 bound to its DNA target.

Abstract: DNA recognition by TAL effectors is mediated by tandem repeats, each 33 to 35 residues in length, that specify nucleotides via unique repeat-variable diresidues (RVDs).

Abstract: The crystal structure of PthXo1 bound to its DNA target was determined by high-throughput computational structure prediction and validated by heavy-atom derivatization.

Abstract: Each repeat forms a left-handed, two-helix bundle that presents an RVD-containing loop to the DNA.

Abstract: The repeats self-associate to form a right-handed superhelix wrapped around the DNA major groove.

Abstract: The first RVD residue forms a stabilizing contact with the protein backbone, while the second makes a base-specific contact to the DNA sense strand.

Abstract: Two degenerate amino-terminal repeats also interact with the DNA.

Abstract: Containing several RVDs and noncanonical associations, the structure illustrates the basis of TAL effector-DNA recognition.


Prediction of creatinine clearance from serum creatinine.

Abstract: A formula has been developed to predict creatinine clearance (Ccr) from serum creatinine (Scr) in adult males: (see article)(15% less in females).

Abstract: Derivation included the relationship found between age and 24-hour creatinine excretion/kg in 249 patients aged 18-92.

Abstract: Values for Ccr were predicted by this formula and four other methods and the results compared with the means of two 24-hour Ccr's measured in 236 patients.

Abstract: The above formula gave a correlation coefficient between predicted and mean measured Ccr's of 0.83; on average, the difference predicted and mean measured values was no greater than that between paired clearances.

Abstract: Factors for age and body weight must be included for reasonable prediction.


Dendritic cells, T cells and lymphatics: dialogues in migration and beyond.

Abstract: Immune cells continuously recirculate through lymph vessels en route from peripheral tissues to the blood.

Abstract: Leuyte trafficking into and within lymph vessels is mediated by an interply with lymphatic endothelial cells (LECs).

Abstract: However, lymphatic vessels are much more than mere conduits for fluid and immune cell transport.

Abstract: Data accumulating during past several years indicate that LECs support T cell survival, induce tolerance to self-antigens, inhibit exaggerated T cell proliferation during immune response and maintain T cell memory.

Abstract: Reciprocally, leukocytes impact LEC biology: lymphatic vessel permeability depends on DCs while lymphocytes regulate LEC proliferation during inflammation.

Abstract: Altogether, these novel results provide important insights on intimate connections between LECs and leukocytes that contribute to the understanding of immune responses.


CRISPR–Cas9 genome editing induces a p53-mediated DNA damage response

Abstract: Here, we report that genome editing by CRISPR–Cas9 induces a p53-mediated DNA damage response and cell cycle arrest in immortalized human retinal pigment epithelial cells, leading to a selection against cells with a functional p53 pathway.

Abstract: Inhibition of p53 prevents the damage response and increases the rate of homologous recombination from a donor template.

Abstract: These results suggest that p53 inhibition may improve the efficiency of genome editing of untransformed cells and that p53 function should be monitored when developing cell-based therapies utilizing CRISPR–Cas9.

Abstract: CRISPR–Cas9-induced DNA damage triggers p53 to limit the efficiency of gene editing in immortalized human retinal pigment epithelial cells.


Comparative Structural Analysis of Lipid Binding START Domains

Abstract: BACKGROUND Steroidogenic acute regulatory (StAR) protein related lipid transfer (START) domains are small globular modules that form a cavity where lipids and lipid hormones bind.

Abstract: These domains can transport ligands to facilitate lipid exchange between biological membranes, and they have been postulated to modulate the activity of other domains of the protein in response to ligand binding.

Abstract: More than a dozen human genes encode START domains, and several of them are implicated in a disease.

Abstract: PRINCIPAL FINDINGS We report crystal structures of the human STARD1, STARD5, STARD13 and STARD14 lipid transfer domains.

Abstract: These represent four of the six functional classes of START domains.

Abstract: SIGNIFICANCE Sequence alignments based on these and previously reported crystal structures define the structural determinants of human START domains, both those related to structural framework and those involved in ligand specificity.

Abstract: ENHANCED VERSION This article can also be viewed as an enhanced version in which the text of the article is integrated with interactive 3D representations and animated transitions.

Abstract: Please note that a web plugin is required to access this enhanced functionality.

Abstract: Instructions for the installation and use of the web plugin are available in Text S1.


Staphylococcus aureus infection dynamics

Abstract: Staphylococcus aureus is a human commensal that can also cause systemic infections.

Abstract: This transition requires evasion of the immune response and the ability to exploit different niches within the host.

Abstract: However, the disease mechanisms and the dominant immune mediators against infection are poorly understood.

Abstract: Previously it has been shown that the infecting S. aureus population goes through a population bottleneck, from which very few bacteria escape to establish the abscesses that are characteristic of many infections.

Abstract: Here we examine the host factors underlying the population bottleneck and subsequent clonal expansion in S. aureus infection models, to identify underpinning principles of infection.

Abstract: The bottleneck is a common feature between models and is independent of S. aureus strain.

Abstract: Interestingly, the high doses of S. aureus required for the widely used "survival" model results in a reduced population bottleneck, suggesting that host defences have been simply overloaded.

Abstract: This brings into question the applicability of the survival model.

Abstract: Depletion of immune mediators revealed key breakpoints and the dynamics of systemic infection.

Abstract: Loss of macrophages, including the liver Kupffer cells, led to increased sensitivity to infection as expected but also loss of the population bottleneck and the spread to other organs still occurred.

Abstract: Conversely, neutrophil depletion led to greater susceptibility to disease but with a concomitant maintenance of the bottleneck and lack of systemic spread.

Abstract: We also used a novel microscopy approach to examine abscess architecture and distribution within organs.

Abstract: From these observations we developed a conceptual model for S. aureus disease from initial infection to mature abscess.

Abstract: This work highlights the need to understand the complexities of the infectious process to be able to assign functions for host and bacterial components, and why S. aureus disease requires a seemingly high infectious dose and how interventions such as a vaccine may be more rationally developed.


Strategies for optimizing maternal nutrition to promote infant development

Abstract: BACKGROUND The growing appreciation of the multi-faceted importance of optimal maternal nutrition to the health and development of the infant and young child is tempered by incompletely resolved strategies for combatting challenges.

Abstract: OBJECTIVE To review the importance of maternal nutrition and strategies being employed to optimize outcomes.

Abstract: METHODS Selected data from recent literature with special focus on rationale for and currently published results of maternal nutrition supplements, including lipid based nutrition supplements.

Abstract: RESULTS 1) An impelling rationale for improving the maternal and in utero environment of low resource populations has emerged to achieve improved fetal and post-natal growth and development.

Abstract: 2) Based partly on population increases in adult height over one-two generations, much can be achieved by reducing poverty.

Abstract: 3) Maternal, newborn and infant characteristics associated with low resource environments include evidence of undernutrition, manifested by underweight and impaired linear growth.

Abstract: 4) Apart from broad public health and educational initiatives, to date, most specific efforts to improve fetal growth and development have included maternal nutrition interventions during gestation.

Abstract: 5) The relatively limited but real benefits of both iron/folic acid (IFA) and multiple micronutrient (MMN) maternal supplements during gestation have now been reasonably defined.

Abstract: 6) Recent investigations of a maternal lipid-based primarily micronutrient supplement (LNS) have not demonstrated a consistent benefit beyond MMN alone.

Abstract: 7) However, effects of both MMN and LNS appear to be enhanced by commencing early in gestation.

Abstract: CONCLUSIONS Poor maternal nutritional status is one of a very few specific factors in the human that not only contributes to impaired fetal and early post-natal growth but for which maternal interventions have demonstrated improved in utero development, documented primarily by both improvements in low birth weights and by partial corrections of impaired birth length.

Abstract: A clearer definition of the benefits achievable by interventions specifically focused on correcting maternal nutrition deficits should not be limited to improvements in the quality of maternal nutrition supplements, but on the cumulative quantity and timing of interventions (also recognizing the heterogeneity between populations).

Abstract: Finally, in an ideal world these steps are only a prelude to improvements in the total environment in which optimal nutrition and other health determinants can be achieved.


Key questions about the checkpoint blockade-are microRNAs an answer?

Abstract: The introduction of immune-checkpoint blockade in the cancer therapy led to a paradigm change of the management of late stage cancers.

Abstract: There are already multiple FDA approved checkpoint inhibitors and many other agents are undergoing phase 2 and early phase 3 clinical trials.

Abstract: The therapeutic indication of immune checkpoint inhibitors expanded in the last years, but still remains unclear who can benefit.

Abstract: MicroRNAs are small RNAs with no coding potential.

Abstract: By complementary pairing to the 3' untranslated region of messenger RNA, microRNAs exert posttranscriptional control of protein expression.

Abstract: A network of microRNAs directly and indirectly controls the expression of checkpoint receptors and several microRNAs can target multiple checkpoint molecules, mimicking the therapeutic effect of a combined immune checkpoint blockade.

Abstract: In this review, we will describe the microRNAs that control the expression of immune checkpoints and we will present four specific issues of the immune checkpoint therapy in cancer: (1) imprecise therapeutic indication, (2) difficult response evaluation, (3) numerous immunologic adverse-events, and (4) the absence of response to immune therapy.

Abstract: Finally, we propose microRNAs as possible solutions for these pitfalls.

Abstract: We consider that in the near future microRNAs could become important therapeutic partners of the immune checkpoint therapy.


Metformin reverses established lung fibrosis in a bleomycin model

Abstract: Fibrosis is a pathological result of a dysfunctional repair response to tissue injury and occurs in a number of organs, including the lungs1.

Abstract: Cellular metabolism regulates tissue repair and remodelling responses to injury2-4.

Abstract: AMPK is a critical sensor of cellular bioenergetics and controls the switch from anabolic to catabolic metabolism5.

Abstract: However, the role of AMPK in fibrosis is not well understood.

Abstract: Here, we demonstrate that in humans with idiopathic pulmonary fibrosis (IPF) and in an experimental mouse model of lung fibrosis, AMPK activity is lower in fibrotic regions associated with metabolically active and apoptosis-resistant myofibroblasts.

Abstract: Pharmacological activation of AMPK in myofibroblasts from lungs of humans with IPF display lower fibrotic activity, along with enhanced mitochondrial biogenesis and normalization of sensitivity to apoptosis.

Abstract: In a bleomycin model of lung fibrosis in mice, metformin therapeutically accelerates the resolution of well-established fibrosis in an AMPK-dependent manner.

Abstract: These studies implicate deficient AMPK activation in non-resolving, pathologic fibrotic processes, and support a role for metformin (or other AMPK activators) to reverse established fibrosis by facilitating deactivation and apoptosis of myofibroblasts.


Are expert athletes 'expert' in the cognitive laboratory? A meta-analytic review of cognition and sport expertise

Abstract: SUMMARY Recent literature has demonstrated the usefulness of fitness and computer-based cognitive training as a means to enhance cognition and brain function.

Abstract: However, it is unclear whether the combination of fitness and cognitive training that results from years of extensive sport training also results in superior performance on tests of cognitive processes.

Abstract: In this study we examine, in a quantitative meta-analysis (k ¼20), the relationship between expertise in sports and laboratory-based measures of cognition.

Abstract: We found that athletes performed better on measures of processing speed and a category of varied attentionalparadigms, andathletesfrominterceptive sporttypesandmalesshowedthelargesteffects.

Abstract: Based on our results, more research should be done with higher-level cognitive tasks, such as tasks of executive function and more varied sub-domains of visual attention.

Abstract: Furthermore, future studies should incorporate more female athletes and use a diverse range of sport types and levelsof expertise.


Effects of Age, Sex, and Ethnicity on the Association Between Apolipoprotein E Genotype and Alzheimer Disease: A Meta-analysis

Abstract: Objective.

Abstract: —To examine more closely the association between apolipoprotein E (APOE) genotype and Alzheimer disease (AD) by age and sex in populations of various ethnic and racial denominations.

Abstract: Data Sources.

Abstract: —Forty research teams contributed data onAPOEgenotype, sex, age at disease onset, and ethnic background for 5930 patients who met criteria for probable or definite AD and 8607 controls without dementia who were recruited from clinical, community, and brain bank sources.

Abstract: Main Outcome Measures.

Abstract: —Odds ratios (ORs) and 95% confidence intervals (Cls) for AD, adjusted for age and study and stratified by major ethnic group (Caucasian, African American, Hispanic, and Japanese) and source, were computed forAPOEgenotypes ∈2/∈2,∈2/∈3,∈2/∈4,∈3/∈4 and ∈4/∈4 relative to the ∈3/∈3 group.

Abstract: The influence of age and sex on the OR for each genotype was assessed using logistic regression procedures.

Abstract: Results.

Abstract: —Among Caucasian subjects from clinic- or autopsy-based studies, the risk of AD was significantly increased for people with genotypes ∈2/∈4 (OR=2.6, 95% Cl=1.6-4.0), ∈3/∈4 (OR=3.2, 95% Cl=2.8-3.8), and ∈4/∈4 (OR=14.9, 95% CI=10.8-20.6); whereas, the ORs were decreased for people with genotypes ∈2/∈2 (OR=0.6, 95% Cl=0.2-2.0) and ∈2/∈3 (OR=0.6, 95% Cl=0.5-0.8).

Abstract: TheAPOE∈4-AD association was weaker among African Americans and Hispanics, but there was significant heterogeneity in ORs among studies of African Americans (P Conclusions.

Abstract: —TheAPOE∈4 allele represents a major risk factor for AD in all ethnic groups studied, across all ages between 40 and 90 years, and in both men and women.

Abstract: The association betweenAPOE∈4 and AD in African Americans requires clarification, and the attenuated effect ofAPOE∈4 in Hispanics should be investigated further.


Comparison of glioblastoma (GBM) molecular classification methods.

Abstract: Glioblastoma (GBM) is the most aggressive and common form of brain cancer in adults.

Abstract: GBM is characterized by poor survival and remarkably high tumors heterogeneity (both intertumoral and intratumoral), and lack of effective therapies.

Abstract: Recent high-throughput data revealed heterogeneous genetic/genomic/epigenetic features and led to multiple methods aiming to classify tumors according to the key molecular events that drive the most aggressive cellular components so that targeted therapies can be developed for individual subtypes.

Abstract: However, GBM molecular subtypes have not led to improvement of patients outcomes.

Abstract: Targeted or tailored therapies for specific mutations or subtypes largely failed due to the complexities arising from intratumoral molecular heterogeneity.

Abstract: Most tumors develop resistance to treatment and soon recur.

Abstract: GBM stem cells (GSCs) have been identified.

Abstract: Recent single cell sequencing studies of GBM suggest that intratumoral cellular heterogeneity can be partially explained by tumor cell hierarchy arising from GBM stem cells.

Abstract: Therefore, the molecular subtypes based on patient derived GSCs may potentially lead to more effective subtype-specific treatments.

Abstract: In this paper, we review the molecular alterations of GBM and molecular subtyping methods as well as subtype plasticity in primary and recurrent tumors emphasizing the clinical relevance of potential targets for further drug development.


Mesenchymal Stromal Cells: From Discovery to Manufacturing and Commercialization

Abstract: Over the last decades, mesenchymal stromal cells (MSC) have been the focus of intense research by academia and industry due to their unique features.

Abstract: MSC can be easily isolated and expanded through in vitro culture by taking full advantage of their self-renewing capacity.

Abstract: In addition, MSC exert immunomodulatory effects and can be differentiated into various lineages, which makes them highly attractive for clinical applications in cell-based therapies.

Abstract: In this review, we attempt to provide a brief historical overview of MSC discovery, characterization, and the first clinical studies conducted.

Abstract: The current MSC manufacturing platforms are reviewed with special attention regarding the use of bioreactors for the production of GMP-compliant clinically relevant cell numbers.

Abstract: The first commercial MSC-based products are also addressed, as well as the remaining challenges to the widespread use of MSC-derived products.


Delta–Notch—and then? Protein interactions and proposed modes of repression by Hes and Hey bHLH factors

Abstract: Hes and Hey genes are the mammalian counterparts of the Hairy and Enhancer-of-split type of genes in Drosophila and they represent the primary targets of the Delta-Notch signaling pathway.

Abstract: Hairy-related factors control multiple steps of embryonic development and misregulation is associated with various defects.

Abstract: Hes and Hey genes (also called Hesr, Chf, Hrt, Herp or gridlock) encode transcriptional regulators of the basic helix-loop-helix class that mainly act as repressors.

Abstract: The molecular details of how Hes and Hey proteins control transcription are still poorly understood, however.

Abstract: Proposed modes of action include direct binding to N- or E-box DNA sequences of target promoters as well as indirect binding through other sequence-specific transcription factors or sequestration of transcriptional activators.

Abstract: Repression may rely on recruitment of corepressors and induction of histone modifications, or even interference with the general transcriptional machinery.

Abstract: All of these models require extensive protein-protein interactions.

Abstract: Here we review data published on protein-protein and protein-DNA interactions of Hairy-related factors and discuss their implications for transcriptional regulation.

Abstract: In addition, we summarize recent progress on the identification of potential target genes and the analysis of mouse models.


The Long Noncoding RNA CAREL Controls Cardiac Regeneration.

Abstract: BACKGROUND Adult mammalian heart loses regeneration ability following ischemic injury due to the loss of cardiomyocyte mitosis.

Abstract: However, the molecular mechanisms underlying the post-mitotic nature of cardiomyocytes remain largely unknown.

Abstract: OBJECTIVES

Abstract: The purpose of this study was to define the essential role of long noncoding ribonucleic acids (lncRNAs) in heart regeneration during postnatal and adult injury.

Abstract: METHODS Myh6-driving cardiomyocyte-specific lncRNA-CAREL transgenic mice and adenovirus-mediated in vivo silencing of endogenous CAREL were used in this study.

Abstract: The effect of CAREL on cardiomyocyte replication and heart regeneration after apical resection or myocardial infarction was assessed by detecting mitosis and cytokinesis.

Abstract: RESULTS An lncRNA CAREL was found significantly up-regulated in cardiomyocytes from neonatal mice (P7) in parallel with loss of regenerative capacity.

Abstract: Cardiac-specific overexpression of CAREL in mice reduced cardiomyocyte division and proliferation and blunted neonatal heart regeneration after injury.

Abstract: Conversely, silencing of CAREL in vivo markedly promoted cardiac regeneration and improved heart functions after myocardial infarction in neonatal and adult mice.

Abstract: CAREL acted as a competing endogenous ribonucleic acid for miR-296 to derepress the expression of Trp53inp1 and Itm2a, the target genes of miR-296.

Abstract: Consistently, overexpression of miR-296 significantly increased cardiomyocyte replication and cardiac regeneration after injury.

Abstract: Decline of cardiac regenerative ability in CAREL transgenic mice was also rescued by miR-296.

Abstract: A short fragment containing the conserved sequence of CAREL reduced the proliferation of human induced pluripotent stem cell-derived cardiomyocytes as the full-length CAREL.

Abstract: CONCLUSIONS LncRNA CAREL regulates cardiomyocyte proliferation and heart regeneration in postnatal and adult heart after injury by acting as a competing endogenous ribonucleic acid on miR-296 that targets Trp53inp1 and Itm2a.


BCAP links IL-1R to the PI3K–mTOR pathway and regulates pathogenic Th17 cell differentiation

Abstract: The toll-like receptor (TLR) and interleukin (IL)-1 family of receptors share several signaling components, including the most upstream adapter, MyD88.

Abstract: We previously reported the discovery of B cell adapter for phosphoinositide 3-kinase (BCAP) as a novel toll-IL-1 receptor homology domain-containing adapter that regulates inflammatory responses downstream of TLR signaling.

Abstract: Here we find that BCAP plays a critical role downstream of both IL-1 and IL-18 receptors to regulate T helper (Th) 17 and Th1 cell differentiation, respectively.

Abstract: Absence of T cell intrinsic BCAP did not alter development of naturally arising Th1 and Th17 lineages but led to defects in differentiation to pathogenic Th17 lineage cells.

Abstract: Consequently, mice that lack BCAP in T cells had reduced susceptibility to experimental autoimmune encephalomyelitis.

Abstract: More importantly, we found that BCAP is critical for IL-1R-induced phosphoinositide 3-kinase-Akt-mechanistic target of rapamycin (mTOR) activation, and minimal inhibition of mTOR completely abrogated IL-1β-induced differentiation of pathogenic Th17 cells, mimicking BCAP deficiency.

Abstract: This study establishes BCAP as a critical link between IL-1R and the metabolic status of activated T cells that ultimately regulates the differentiation of inflammatory Th17 cells.


Adapting the WHO package of essential noncommunicable disease interventions, Samoa

Abstract: Problem Samoa has been struggling to address the burden of noncommunicable diseases at the health system, community and individual levels.

Abstract: Approach The World Health Organization (WHO) package of essential noncommunicable disease interventions for primary health care in low-resource settings was adopted in seven villages throughout Samoa in 2015.

Abstract: The National Steering Committee Members designed and implemented a screening process, and local facilitators and health-care workers collected health and lifestyle data.

Abstract: The WHO/International Society of Hypertension risk assessment was used on villagers older than 40 years to identify people at high risk of noncommunicable disease.

Abstract: Local setting Samoa is a small island developing state with increasing morbidity and mortality due to noncommunicable diseases.

Abstract: A national representative survey indicated that 50.1% (595/1188) of the Samoan adult population is at high risk of such diseases.

Abstract: High numbers of noncommunicable diseases are undiagnosed or untreated, because of shortage of health-care staff and lack of awareness of risk factors.

Abstract: Relevant changes The teams collected data from 2234 adults.

Abstract: For people older than 40 years, 6.7% (54/804) were identified as being at high-risk and were encouraged to seek treatment or manage risk factors.

Abstract: Community members developed an awareness programme to improve understanding of lifestyle risk factors.

Abstract: Lessons learnt Engaging community members was crucial in conducting a successful screening campaign.

Abstract: By identifying those villagers at high risk of developing noncommunicable diseases, early intervention was possible.

Abstract: Education improved awareness of the symptom-free nature of early-stage noncommunicable diseases.